Sequence detailsbmy_01229 (Coding sequence)

Part of scaffold_23 (SequenceType object (1))

For more information consult the page for scaffold_23 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RCAN1ENSTTRG00000015428 (Bottlenosed dolphin)

Gene Details

regulator of calcineurin 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014623, Bottlenosed dolphin)

Protein Percentage 66.5%
cDNA percentage 66.33%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0269)

RCAN1 (Minke Whale)

Gene Details

regulator of calcineurin 1

External Links

Gene match (Identifier: BACU010413, Minke Whale)

Protein Percentage 91.3%
cDNA percentage 94.02%
Ka/Ks Ratio 0.7323 (Ka = 0.0583, Ks = 0.0797)

Additional orthologs identified in other species via the OPTIC pipeline.

RCAN1 (Cow)   RCAN1 (Human)   Rcan1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 594 bp    Location:2007104..1998172   Strand:-
Raw sequence 
>bmy_01229
ATGCACTTCAGAAACTTTAACTACAGTTTTAGCTCCCTGATTGCCTGTGTGGCAAACAGTGAGATCTTCAGCGAAAGTGAAACCAGGGCCAAATTTGAATCCCTCTTTAGGACATATGACAAAGATATCACCTTTCAGTATTTTAAGAGCTTCAAACGAGTCAGAATAAACTTCAGCAACCCATTATCTGCAGCAGATGCCAGACTCCAGCTACATAAGACTGAATTTCTTGGAAAGGAAATGAAATTATATTTTGCTCAGACTTTACACATAGGAAGTTCACACCTGGCTCCACCAAACCCAGACAAGCAGTTTCTGATCTCTCCTCCTGCCTCGCCGCCGGTCGGTTGGAAACAAGTGGAAGACGCTACTCCCGTCATAAATTATGACCTTTTATATGCTATCTCCAAGCTGGGGCCAGGGGAAAAGTATGAATTGCACGCAGCGACCGACACCACTCCCAGCGTGGTGGTCCACGTGTGTGAGAGCGATCAGGAGAACGAGGAAGAAGACGAGATGGAAAGAATGAAGAGACCCAAACCCAAAATTATCCAGACCAGGAGGCCGGAGTACTCGCCCGTCCACTTAAGCTGA

Related Sequences

bmy_01229T0 SequenceType object (3)

Length: 198 aa      
>bmy_01229T0
MHFRNFNYSFSSLIACVANSEIFSESETRAKFESLFRTYDKDITFQYFKSFKRVRINFSNPLSAADARLQLHKTEFLGKEMKLYFAQTLHIGSSHLAPPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAISKLGPGEKYELHAATDTTPSVVVHVCESDQENEEEDEMERMKRPKPKIIQTRRPEYSPVHLS*