Part of scaffold_23 (SequenceType object (1))

For more information consult the page for scaffold_23 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RUNX1ENSTTRG00000014160 (Bottlenosed dolphin)

Gene Details

runt-related transcription factor 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013431, Bottlenosed dolphin)

Protein Percentage 78.6%
cDNA percentage 77.82%
Ka/Ks Ratio 0.14084 (Ka = 0.0292, Ks = 0.2072)

RUNX1ENSBTAG00000004742 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000006224, Cow)

Protein Percentage 85.21%
cDNA percentage 84.7%
Ka/Ks Ratio 0.16205 (Ka = 0.1025, Ks = 0.6324)

RUNX1 (Minke Whale)

Gene Details

runt-related transcription factor 1

External Links

Gene match (Identifier: BACU010416, Minke Whale)

Protein Percentage 87.16%
cDNA percentage 89.36%
Ka/Ks Ratio 0.43026 (Ka = 0.0953, Ks = 0.2215)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 771 bp    Location:2257766..2249064   Strand:-
>bmy_01232
AGAAAACAGGCGAAACTCCGACATGAGAAGCTCGCCATCACCACCTTCTGGCCCACTGCTGCCAATGAAGCCAAACACAAAAAGAAAGAAGTAGATCAGTATGAGGGAAACCGGGTAGAGGGCTCTCGGGAGAAGAATACAAGGCAGATCCAGCCGTCCCCACCATGGTCCTACGAGCAGTCCTACCAGTACCTGGGACCCATTGCCTCTCCTTCTGTCCACCCAGCAACACCCATCTCGCCTGGACGGGCCAGCGGCATGACAACCCTCTCTGCAGAGCTTTCCAGTCGGCTCTCAACGGCGCCCGACCTGACAGCCTTCGGCGACCCGCGCCAGTTTTCCGCGCTGCCCTCCATCTCCGACCCCCGCATGCACTACCCCGGCGCCTTCACCTACTCCCCGACGCCCGTCACGTCGGGCATCGGCATCGGCATGTCGGCCATGAGCTCGGCCACGCGCTACCACACGTACCTGCCGCCGCCCTACCCCGGCTCGTCGCAGGCGCAGGGCGGCCCGTTCCAGGCCAGCTCGCCGTCCTACCACCTGTACTACGGCGCGTCAGCAGGCTCCTACCAGTTCTCCATGGTGGGCGGCGAGCGGTCGCCGCCGCGCATTCTGCCGCCCTGCACCAACGCCTCCACCGGCTCGGCGCTGCTCAACCCCAGCCTCCCGAACCAGAGCGACGTGGTGGAGGCCGAGGGCAGCCACAGCAACTCCCCAACCAACATGGCGCCCGCCGCGCGCCTCGAGGAGGCCGTCTGGCGACCCTAC

Related Sequences

bmy_01232T0 SequenceType object (3)

Length: 257 aa      View alignments
>bmy_01232T0
RKQAKLRHEKLAITTFWPTAANEAKHKKKEVDQYEGNRVEGSREKNTRQIQPSPPWSYEQSYQYLGPIASPSVHPATPISPGRASGMTTLSAELSSRLSTAPDLTAFGDPRQFSALPSISDPRMHYPGAFTYSPTPVTSGIGIGMSAMSSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMVGGERSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSPTNMAPAARLEEAVWRPY