Part of scaffold_24 (Scaffold)

For more information consult the page for scaffold_24 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMF1 ENSTTRG00000015306 (Bottlenosed dolphin)

Gene Details

TATA element modulatory factor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014517, Bottlenosed dolphin)

Protein Percentage 96.52%
cDNA percentage 96.89%
Ka/Ks Ratio 0.24023 (Ka = 0.0188, Ks = 0.0784)

TMF1 ENSBTAG00000015554 (Cow)

Gene Details

TATA element modulatory factor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000044097, Cow)

Protein Percentage 93.85%
cDNA percentage 94.54%
Ka/Ks Ratio 0.21606 (Ka = 0.0321, Ks = 0.1487)

TMF1  (Minke Whale)

Gene Details

TATA element modulatory factor 1

External Links

Gene match (Identifier: BACU015111, Minke Whale)

Protein Percentage 94.55%
cDNA percentage 95.87%
Ka/Ks Ratio 0.5469 (Ka = 0.0364, Ks = 0.0666)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3030 bp    Location:1527976..1557106   Strand:+
>bmy_01243
ATACTTTTTTCTTTTTTAATATATATATATTTTTTTGTCAAAGGAATAAGCCCCCCTGTCAGTGGAGGATGGGATACTTCAACCTGGGGGTTAAAATCCAACACTGAACCTCAGAGTCAACCRGTAGCGTCTCCTAAAGCAATTACAAAGCCAGTTCGGAGAACTGTGGTAGATGAATCTGAAAATTTCTTCAGTGCCTTTCTCTCTCCCACCGATGTCCAGACTATTCAGAAGAGTCCAGTGGTATCAAAACCACCAGCTAAATCACAGCGACCAGAAGAAGAAGTGAAAAGCACCTTACAGGAGTCCTTGCACGCTGGACAGTCAAGAACAACTGAAGCCCCTGAGTCCAAAGTAGAAGACTCTCCTCCGTGTGTATCAGGGGAAACTCTGACAGCGAGTACTCTGTCTCCTAAAACTAAGGGCAAGCATGAAGAAACTCTTAATAAAGAATCTGATACAAAGGTGTCAACCGTACATTTGAAAGTATCTGAAAGTGTAATTAATGTGAAAACAACTAGGGAAAATGTATCTAATATGCCTACACAGCCTCTCACAGCGGAAACAAAGGACATGGCTTTGGAGCCTAAGGAGCAAAAACATGAAGACAGACAGAGCAATACACCTTCTCCTCCTGTTAGTACCTTCTCATCAGGTACTTCTACCACTAGTGATATTGAAGTTTTAGATCACGAAAGTGTAATAAGTGAGAGCTCAGCAAGTTCGAGACAAGAGACTACAGATTCAAAATCAAGTCTGCACTTGATGCAGACATCCTTTCAGCTTCTCTCGGCATCTGCTTGTCCTGAATATAATCGTTTAGATGATTTCCAAAAACTCACTGAGAGTTGCTGCTCATCTGATGCTTTTGAAAGAATAGACTCGTTTAGTGTACAGTCATTAGATAGCCGTAGTGTAAGCGAAATCAATTCAGATGATGAATTGTCAGGCAAGGGATATGCTTTAGTACCTATTATAGTTAATTCTTCAACTCCAAAGGCTAAAACAGTTGAATCTGTTGAGGGAAAACCTGAAGAAGCAAATGAAACATTAATTGTGCCCACTGAAGAAACAGAAATGGAAGAAAGTGGACGAAGTGCAACTCCTGTTAACTGTGAACAGCCTGATGTCTTGGTTTCTTCTACACCAGTAAATGAAGGGCATACTGTCCTAGACAAGGTGGCTGAGCAGCCTGAAGCTCCTGAAAGTCAGCCAGAAGCACTTTCTGAGAAGGAAGATGTATTCAAGACAGTTGAATTTCTGAATGAGAAACTGGATAAAAGGGAAGCTCAGTTATTATCTCTTAGTAAAGAAAAAGCACTTCTAGAAGAAGCTTATGATAATCTGAAAGATGAAATGATCAGAGTGAAAGAAGAGARCAGCAGCATTTCTTCCTTGAAAGATGAGTTTACTCAAAGAATTGCAGAAGCAGAAAAGAAAGTTCAGCTAGCCTGCAAAGAGAGAGATGCTGCTAAAAAGGAAATCAAAAGTATAAAAGATGAACTTGCTACTAGATTAAATAGTAGTGAAACGGCAGACCTTTTGAAAGAGAAAGATGAGCAGATCCGAGGGTTAATGGAAGAAGGAGAAAAACTTTCAAAACAGCAGCTGCATAATTCTAACATCATTAAGAAATTAAGAGCTAAAGACAGAGAAAATGAAAATATTATTGCAAAGCTGAACAAAAAAGTTAAAGAGTTAGAAGAAGAGTTACAACATTTAAAACAGGTCCTTGATGGCAAAGAAGAGGTTGAGAAACAACATAGAGAAAATATTAAGAAACTAAATTCTGTGGTAGAACGCCAAGAGAAGGATCTTGGCCGACTTCAAGTAGACATGAATGAGCTTGAAGAAAAGAACCGAAGTATTCAGGCTGCTCTTGATAGTGCATACAAAGAACTTACTGATCTCCACAAAGCCAATGCTGCAAAGGATAGTGAAGCCCAGGAAGCTGCTCTAAGTCGTGAAACGAGAGCTAAAGAAGAACTTTCTGCAGCACTGGAGAAGGCCCAAGAAGAAGCCCGTCAGCAGCAAGAAACATTAGTGATTCAAGTGGGGGACCTTAGGCTGGCACTGCAACGTGCAGAGCAAGCAGCTGCCAGAAAAGAGGATTATTTACGTCATGAGATCAGTGAACTCCAGCAGAGACTCCAGGAAGCAGAGAATCGAAACCAAGAACTGAGTCAAAGTGTTTCATCAACAACAAGACCATTGCTTCGACAGATAGAAAATTTGCAAGCAACTCTAGGGTCCCAGACGTCATCATGGGAGAAGTTAGAGAAGAATCTTTCTGATAGACTTGGTGAATCCCAGACCTTGTTGGCAGCAGCAGTTGAGAGAGAACGTGCGGCCACAGAAGAACTTCTTGCCAACAAAATTCAAATGTCTTCCATGGAGTCACAGAATTCTCTCTTAAGACAGGAAAACAGTAGATTTCAGGCCCAGCTAGAATCAGAGAAAAATAGGATAAGAAAACTAGAGGATGAAAATAATAGGTACCAGGTTGAATTAGAAAACCTAAAAGGTGAATAYGTAAGAACACTTGAAGAGACAAGGAAAGAAAAGACACTGTTGAATAGTCAGTTAGAAATGGAGAAAATGAAAGTTGAACAGGAAAGGAAGAAAGCAGTTTTCACTCAAGAAGCAATAAAAGAAAAGGAACGGAAGCCATTTTCTGTTTCTAGCACTCCCACAATGTCACGCTCAAGTTCGATAAGTGGAGTTGATATGGCAGGGCTACAAACATCTTTTATGTCTCAGCTAGAAATTGGCAATCTAGAAAAAACACGCTCCATAATGGCTGAAGAGCTAGTTAAATTAACAAATCAAAATGATGAACTTGAAGAGAAAGTGAAGGAGATACCCAAACTTCGAACTCAGCTAAGAGATTTGGATCAAAGATACAACACTATTCTGCAGATGTATGGAGAAAAAGCAGAAGAGGCAGAAGAACTTCGATTAGATCTTGAAGATGTAAAAAATATGTATAAGACTCAAATAGATGAACTTTTAAGACAAAGGCTCAGTTAA

Related Sequences

bmy_01243T0 Protein

Length: 1010 aa      View alignments
>bmy_01243T0
ILFSFLIYIYFFVKGISPPVSGGWDTSTWGLKSNTEPQSQPVASPKAITKPVRRTVVDESENFFSAFLSPTDVQTIQKSPVVSKPPAKSQRPEEEVKSTLQESLHAGQSRTTEAPESKVEDSPPCVSGETLTASTLSPKTKGKHEETLNKESDTKVSTVHLKVSESVINVKTTRENVSNMPTQPLTAETKDMALEPKEQKHEDRQSNTPSPPVSTFSSGTSTTSDIEVLDHESVISESSASSRQETTDSKSSLHLMQTSFQLLSASACPEYNRLDDFQKLTESCCSSDAFERIDSFSVQSLDSRSVSEINSDDELSGKGYALVPIIVNSSTPKAKTVESVEGKPEEANETLIVPTEETEMEESGRSATPVNCEQPDVLVSSTPVNEGHTVLDKVAEQPEAPESQPEALSEKEDVFKTVEFLNEKLDKREAQLLSLSKEKALLEEAYDNLKDEMIRVKEEXSSISSLKDEFTQRIAEAEKKVQLACKERDAAKKEIKSIKDELATRLNSSETADLLKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKLRAKDRENENIIAKLNKKVKELEEELQHLKQVLDGKEEVEKQHRENIKKLNSVVERQEKDLGRLQVDMNELEEKNRSIQAALDSAYKELTDLHKANAAKDSEAQEAALSRETRAKEELSAALEKAQEEARQQQETLVIQVGDLRLALQRAEQAAARKEDYLRHEISELQQRLQEAENRNQELSQSVSSTTRPLLRQIENLQATLGSQTSSWEKLEKNLSDRLGESQTLLAAAVERERAATEELLANKIQMSSMESQNSLLRQENSRFQAQLESEKNRIRKLEDENNRYQVELENLKGEYVRTLEETRKEKTLLNSQLEMEKMKVEQERKKAVFTQEAIKEKERKPFSVSSTPTMSRSSSISGVDMAGLQTSFMSQLEIGNLEKTRSIMAEELVKLTNQNDELEEKVKEIPKLRTQLRDLDQRYNTILQMYGEKAEEAEELRLDLEDVKNMYKTQIDELLRQRLS*