Part of scaffold_25 (Scaffold)

For more information consult the page for scaffold_25 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000012232 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011599, Bottlenosed dolphin)

Protein Percentage 97.34%
cDNA percentage 98.1%
Ka/Ks Ratio 0.23577 (Ka = 0.0116, Ks = 0.0494)

RAI2 ENSBTAG00000039049 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000050100, Cow)

Protein Percentage 88.72%
cDNA percentage 89.67%
Ka/Ks Ratio 0.12967 (Ka = 0.0542, Ks = 0.4183)

RAI2  (Minke Whale)

Gene Details

retinoic acid induced 2

External Links

Gene match (Identifier: BACU004917, Minke Whale)

Protein Percentage 97.67%
cDNA percentage 98.52%
Ka/Ks Ratio 0.32399 (Ka = 0.0108, Ks = 0.0333)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1584 bp    Location:427162..428745   Strand:+
>bmy_01252
ATGGACGATCTGCAGTCCCAGAACCTCTCCATGGACATGACCGACTCCTCCCCTGCCTTGACCAATAACAGACTGGAGAATGGCATGGCCCAGCTGATCACCACTGAGGCCTGGAACATCAACTCCACCGACCTGGTAAAGAAGGCCCTGGTGACCGTGCCGGCCCCGTCCATTCTGAACCCCCCGGCTGAGTCCCAGAGCGGCATGGCTCTGAAGGTAGCGGCCACCGTGCTGCAGCCCCTGTGCCTCGGGGAGAGTCCGGTGGTGATGCCCATTCACATGCAGGTGGAGGGCAGCTCCGCGCCAGAGCTCAACCCTAACGGCAACGCCACTTACGTCATGACCACACAGGGCCCCGTGCAGCTGCCGGTGGTGCTGGAGCAGCACGTCTTCCAGCACCTCAACTCCCCTCTGGTCCTGCCACAGGAGGCCCCGTGCTCCTCCAGCGCCATCCACAACAACCTCTTCCAGGGAGCCGAGGACCCCGAGGGCCAGCCCCAGCTCCTGGACCTGAGGATCCCCAGCCAGCCGCAGGAGCCCACGTTGCCCTTCGAAGCCGTGCTCCAGAATTTGTTTCCTTCGCAGGGCGCTCTCGGCCCTCCACCCTGTCAGCCTCCTCCGGGATACGCCCCTGTGCCCCCCCAGCCCTTTAACTCCCCCTTGTCCCCCCTGGTCCCGCCGGCCACCCTCTTGGTTCCCTACCCTGTGATCGTCCCCTTGCCTGTGCCGGTCCCCATCCCCATCCCCATCCCAGTGCCTCAGAGTCCTGAATCCAAGTTCAGCCCCAGCTTCCGAAAGCCACCATCTTCCTTCGGCCTACACCCCTTCAAAGGCACCCAGACCCCTCTCCAGAAGGAGGAACTGAAGCCCTTCGACCTCCTCCCGCCGAGGGAGTACTTCCAGCTCGGCCGCCACACCGTCATCAAGATGGGGAGTGAGAACGAGGCCCTGGATCTCTCCATGAAGTCGGTGCCCTGGCTCAAGGCTGGCGAAGTCAGTCCCCCGATGTGCCAGGAAGATGCAGCCCTAGACCTGTCACTGGCAGCCCACCGGAAATCTGAGCCTCCCCCTGAGACATTGTATGACAGCAGCGGGTCAGTGGACAGCCCAGGTCACACTGTGATGGAGAAACTTCCCAGTGGCACGGAAGTGCCCTTTGCCCCCGCCACGCCCCACGAGGCCTCAGCCGTGATGGTTAGTCACATGGGCAGCAGCGACGCCGCCGCCGAGCCGCCCAGCCAGCCCAGCGGTGAGGTCAAGGCTGAAAATAACATTGAGATTGTGAGCGAGTCCCAGGCGGCCAAGGTGATCGTCTCCGTGGAAGACACTGTGCCTGCCATCTTCTGTGGCAAGATGAAAGGCCTCTCGGGGGTGTCCACCAAAAACTTCTCCTTCAAAAGAGAAGACTCCATGCTTCAGGGCTATGACATCAACAGCCCAGGAGAAGAGTCCATGGGAAACACGGAGCCCCTTAGGAAACCCGTCAAAAACCGGAGCATAAAGTTAAAGAAAATGAACTCCCAGGAAATACACATGCTCCCAATCAAAAAACAACGGCTGGCCACCTTTTTTCCAAGAAAGTAA

Related Sequences

bmy_01252T0 Protein

Length: 528 aa      View alignments
>bmy_01252T0
MDDLQSQNLSMDMTDSSPALTNNRLENGMAQLITTEAWNINSTDLVKKALVTVPAPSILNPPAESQSGMALKVAATVLQPLCLGESPVVMPIHMQVEGSSAPELNPNGNATYVMTTQGPVQLPVVLEQHVFQHLNSPLVLPQEAPCSSSAIHNNLFQGAEDPEGQPQLLDLRIPSQPQEPTLPFEAVLQNLFPSQGALGPPPCQPPPGYAPVPPQPFNSPLSPLVPPATLLVPYPVIVPLPVPVPIPIPIPVPQSPESKFSPSFRKPPSSFGLHPFKGTQTPLQKEELKPFDLLPPREYFQLGRHTVIKMGSENEALDLSMKSVPWLKAGEVSPPMCQEDAALDLSLAAHRKSEPPPETLYDSSGSVDSPGHTVMEKLPSGTEVPFAPATPHEASAVMVSHMGSSDAAAEPPSQPSGEVKAENNIEIVSESQAAKVIVSVEDTVPAIFCGKMKGLSGVSTKNFSFKREDSMLQGYDINSPGEESMGNTEPLRKPVKNRSIKLKKMNSQEIHMLPIKKQRLATFFPRK*