Sequence detailsbmy_01252 (Coding sequence)

Part of scaffold_25 (SequenceType object (1))

For more information consult the page for scaffold_25 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000012232 (Bottlenosed dolphin)

Gene Details

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011599, Bottlenosed dolphin)

Protein Percentage 97.34%
cDNA percentage 98.1%
Ka/Ks Ratio 0.23577 (Ka = 0.0116, Ks = 0.0494)

RAI2ENSBTAG00000039049 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000050100, Cow)

Protein Percentage 88.72%
cDNA percentage 89.67%
Ka/Ks Ratio 0.12967 (Ka = 0.0542, Ks = 0.4183)

RAI2 (Minke Whale)

Gene Details

retinoic acid induced 2

External Links

Gene match (Identifier: BACU004917, Minke Whale)

Protein Percentage 97.67%
cDNA percentage 98.52%
Ka/Ks Ratio 0.32399 (Ka = 0.0108, Ks = 0.0333)

Additional orthologs identified in other species via the OPTIC pipeline.

RAI2 (Human)   Rai2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1584 bp    Location:427162..428745   Strand:+
Raw sequence 
>bmy_01252
ATGGACGATCTGCAGTCCCAGAACCTCTCCATGGACATGACCGACTCCTCCCCTGCCTTGACCAATAACAGACTGGAGAATGGCATGGCCCAGCTGATCACCACTGAGGCCTGGAACATCAACTCCACCGACCTGGTAAAGAAGGCCCTGGTGACCGTGCCGGCCCCGTCCATTCTGAACCCCCCGGCTGAGTCCCAGAGCGGCATGGCTCTGAAGGTAGCGGCCACCGTGCTGCAGCCCCTGTGCCTCGGGGAGAGTCCGGTGGTGATGCCCATTCACATGCAGGTGGAGGGCAGCTCCGCGCCAGAGCTCAACCCTAACGGCAACGCCACTTACGTCATGACCACACAGGGCCCCGTGCAGCTGCCGGTGGTGCTGGAGCAGCACGTCTTCCAGCACCTCAACTCCCCTCTGGTCCTGCCACAGGAGGCCCCGTGCTCCTCCAGCGCCATCCACAACAACCTCTTCCAGGGAGCCGAGGACCCCGAGGGCCAGCCCCAGCTCCTGGACCTGAGGATCCCCAGCCAGCCGCAGGAGCCCACGTTGCCCTTCGAAGCCGTGCTCCAGAATTTGTTTCCTTCGCAGGGCGCTCTCGGCCCTCCACCCTGTCAGCCTCCTCCGGGATACGCCCCTGTGCCCCCCCAGCCCTTTAACTCCCCCTTGTCCCCCCTGGTCCCGCCGGCCACCCTCTTGGTTCCCTACCCTGTGATCGTCCCCTTGCCTGTGCCGGTCCCCATCCCCATCCCCATCCCAGTGCCTCAGAGTCCTGAATCCAAGTTCAGCCCCAGCTTCCGAAAGCCACCATCTTCCTTCGGCCTACACCCCTTCAAAGGCACCCAGACCCCTCTCCAGAAGGAGGAACTGAAGCCCTTCGACCTCCTCCCGCCGAGGGAGTACTTCCAGCTCGGCCGCCACACCGTCATCAAGATGGGGAGTGAGAACGAGGCCCTGGATCTCTCCATGAAGTCGGTGCCCTGGCTCAAGGCTGGCGAAGTCAGTCCCCCGATGTGCCAGGAAGATGCAGCCCTAGACCTGTCACTGGCAGCCCACCGGAAATCTGAGCCTCCCCCTGAGACATTGTATGACAGCAGCGGGTCAGTGGACAGCCCAGGTCACACTGTGATGGAGAAACTTCCCAGTGGCACGGAAGTGCCCTTTGCCCCCGCCACGCCCCACGAGGCCTCAGCCGTGATGGTTAGTCACATGGGCAGCAGCGACGCCGCCGCCGAGCCGCCCAGCCAGCCCAGCGGTGAGGTCAAGGCTGAAAATAACATTGAGATTGTGAGCGAGTCCCAGGCGGCCAAGGTGATCGTCTCCGTGGAAGACACTGTGCCTGCCATCTTCTGTGGCAAGATGAAAGGCCTCTCGGGGGTGTCCACCAAAAACTTCTCCTTCAAAAGAGAAGACTCCATGCTTCAGGGCTATGACATCAACAGCCCAGGAGAAGAGTCCATGGGAAACACGGAGCCCCTTAGGAAACCCGTCAAAAACCGGAGCATAAAGTTAAAGAAAATGAACTCCCAGGAAATACACATGCTCCCAATCAAAAAACAACGGCTGGCCACCTTTTTTCCAAGAAAGTAA

Related Sequences

bmy_01252T0 SequenceType object (3)

Length: 528 aa      View alignments
>bmy_01252T0
MDDLQSQNLSMDMTDSSPALTNNRLENGMAQLITTEAWNINSTDLVKKALVTVPAPSILNPPAESQSGMALKVAATVLQPLCLGESPVVMPIHMQVEGSSAPELNPNGNATYVMTTQGPVQLPVVLEQHVFQHLNSPLVLPQEAPCSSSAIHNNLFQGAEDPEGQPQLLDLRIPSQPQEPTLPFEAVLQNLFPSQGALGPPPCQPPPGYAPVPPQPFNSPLSPLVPPATLLVPYPVIVPLPVPVPIPIPIPVPQSPESKFSPSFRKPPSSFGLHPFKGTQTPLQKEELKPFDLLPPREYFQLGRHTVIKMGSENEALDLSMKSVPWLKAGEVSPPMCQEDAALDLSLAAHRKSEPPPETLYDSSGSVDSPGHTVMEKLPSGTEVPFAPATPHEASAVMVSHMGSSDAAAEPPSQPSGEVKAENNIEIVSESQAAKVIVSVEDTVPAIFCGKMKGLSGVSTKNFSFKREDSMLQGYDINSPGEESMGNTEPLRKPVKNRSIKLKKMNSQEIHMLPIKKQRLATFFPRK*