Part of scaffold_25 (Scaffold)

For more information consult the page for scaffold_25 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SYAP1 ENSTTRG00000013331 (Bottlenosed dolphin)

Gene Details

synapse associated protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012647, Bottlenosed dolphin)

Protein Percentage 97.8%
cDNA percentage 98.64%
Ka/Ks Ratio 0.56751 (Ka = 0.0111, Ks = 0.0196)

SYAP1 ENSBTAG00000003316 (Cow)

Gene Details

synapse-associated protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004296, Cow)

Protein Percentage 91.98%
cDNA percentage 93.83%
Ka/Ks Ratio 0.30928 (Ka = 0.0406, Ks = 0.1312)

SYAP1  (Minke Whale)

Gene Details

synapse associated protein 1

External Links

Gene match (Identifier: BACU004910, Minke Whale)

Protein Percentage 98.77%
cDNA percentage 99.07%
Ka/Ks Ratio 0.25119 (Ka = 0.0055, Ks = 0.0218)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 975 bp    Location:1435377..1406291   Strand:-
>bmy_01261
ATGTTCCGGGGTTTGAGCAGTTGGTTTGGCTTGGAGCAGCCGGCGGCGGGTGGCCGGCAGTACCAGGGAGACGGACAGCCCAAGGGAGACGCTCCACCCGAGCAGCGCTCCGAGGCGGTGGCGGAGTCCGCGGAGGGGGAGCTACAACAAGCCGGGGACCAGGAGCTCCTTCACCAGGCCAAAGGCCTCGGCAACTATCTATTTAACTTTGCAACTGCTGCTACAAAAAAGATAACCGAATCAGTTACTGAAACAGCACAAACAATAAAGAAATCAGTAGAAGAAGGAAAGATAGATGACATCATTGATAAGACAATTATAGGAGATTTTCAGAAGGAACAGAAAAAATTTGACAAGAGGAACTTCCTTCGTGACCCTCCAGCCGGCGTGCAGTTTAACTTTGACTTTGATCAGATGTACCCTGTCGCCCTGGTCATGCTCCAAGAGGACGAGCTCCTGAGCAGGATGAGATTTGCCCTTGTTCCTAAACTTGTGAAGGAAGAAGTGTTTTGGAGGAACTACTTTTACCGCGTCTCCCTGATTAAGCAGTCAGCCCAGCTCACGGCTCTGGCGGCCCAGCAGCAGGCTACCGGGAAGGAGGAGAAGAGCCACGGCAGAGAGGATGAGTTGCCACTGACAGAGGCAGTACGGCCCAAAACGCCACCTGTTGTAATCAAACCTCAACTTAAAACTCAAGAGGATGAAGAGGAGATTTCTACCAGCCCAGGTGTTTCTGAGTTTGTCAGTGACGCCTTTGATTCCTGTAACTTCGATCAGGAGGATCTGAGGAAGGAAATGGAGCAGCTGGTGCTGGACAAAAAAGAGGAGGAGACAGTCGCACTGGAAGAGGATTCTGCAGATTGGGAGAAGGAACTACAACAGGAACTTCAAGAATACGAAGTGGTGACAGAATCAGAGAAACGAGATGAAAACTGGGATAAGGAGATAGAGAAAATGCTGCAGGAAGAAAATTAG

Related Sequences

bmy_01261T0 Protein

Length: 325 aa      View alignments
>bmy_01261T0
MFRGLSSWFGLEQPAAGGRQYQGDGQPKGDAPPEQRSEAVAESAEGELQQAGDQELLHQAKGLGNYLFNFATAATKKITESVTETAQTIKKSVEEGKIDDIIDKTIIGDFQKEQKKFDKRNFLRDPPAGVQFNFDFDQMYPVALVMLQEDELLSRMRFALVPKLVKEEVFWRNYFYRVSLIKQSAQLTALAAQQQATGKEEKSHGREDELPLTEAVRPKTPPVVIKPQLKTQEDEEEISTSPGVSEFVSDAFDSCNFDQEDLRKEMEQLVLDKKEEETVALEEDSADWEKELQQELQEYEVVTESEKRDENWDKEIEKMLQEEN*