Part of scaffold_25 (Scaffold)

For more information consult the page for scaffold_25 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PIR ENSTTRG00000006770 (Bottlenosed dolphin)

Gene Details

pirin (iron-binding nuclear protein)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006401, Bottlenosed dolphin)

Protein Percentage 95.43%
cDNA percentage 97.46%
Ka/Ks Ratio 0.46246 (Ka = 0.0173, Ks = 0.0373)

PIR ENSBTAG00000009477 (Cow)

Gene Details

pirin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012475, Cow)

Protein Percentage 91.92%
cDNA percentage 94.11%
Ka/Ks Ratio 0.36279 (Ka = 0.0395, Ks = 0.1088)

PIR  (Minke Whale)

Gene Details

pirin (iron-binding nuclear protein)

External Links

Gene match (Identifier: BACU019218, Minke Whale)

Protein Percentage 98.48%
cDNA percentage 99.16%
Ka/Ks Ratio 0.1233 (Ka = 0.0022, Ks = 0.0175)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 597 bp    Location:2577265..2636382   Strand:+
>bmy_01275
ATGACCGCGGGCCGGGGCATCGTGCACGCCGAGATGCCTTGCTCAGAGGAGCCAGTCCACGGCCTACAACTGTGGGTTAATTTGAGGAGCCCACAGAAGATGGTGGAGCCTCGGTACCAGGAACTGAAAAGCAACGAAATCCCTAAACCCAGTAAGGAGGGCGTGACCGTTGCTGTCATTTCTGGAGAAGCCCTGGGAGTCAAGTCCAAGATTTACACTTACACACCAACTTTATATTTGGACTTCAAATTGGGCCAAGGAGCAAAGCATTCCCAGCCTATTCCTAAAGGGTGGACAAGCTTCATTTATACCATATCTGGAAATGTGTATRTTGGACCTGATGACACACAACAAAAAATAGAACCTCATCACACAGCCGTGCTGGGGGAAGGTGACAGTGTCCAGGTGGAGAACAAGGATCCTGAGAGAAGCCRCTTCGTCCTGATTGCTGGGGAGCCATTAAGAGAACCAGTTGTCCAACATGGTCCATTTGTGATGAACACAGATGAAGAGATTTCTCAGGCCATTCTTGATTTCAGAAATGCGAAAAACGGCTTTGAAAGAGCCAAAACCTGGAAATCAAAGATTGGAAACTAG

Related Sequences

bmy_01275T0 Protein

Length: 199 aa      View alignments
>bmy_01275T0
MTAGRGIVHAEMPCSEEPVHGLQLWVNLRSPQKMVEPRYQELKSNEIPKPSKEGVTVAVISGEALGVKSKIYTYTPTLYLDFKLGQGAKHSQPIPKGWTSFIYTISGNVYXGPDDTQQKIEPHHTAVLGEGDSVQVENKDPERSXFVLIAGEPLREPVVQHGPFVMNTDEEISQAILDFRNAKNGFERAKTWKSKIGN*