Part of scaffold_25 (Scaffold)

For more information consult the page for scaffold_25 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FIGF ENSTTRG00000006764 (Bottlenosed dolphin)

Gene Details

c-fos induced growth factor (vascular endothelial growth factor D)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006399, Bottlenosed dolphin)

Protein Percentage 96.36%
cDNA percentage 97.73%
Ka/Ks Ratio 0.57528 (Ka = 0.0185, Ks = 0.0321)

FIGF ENSBTAG00000009476 (Cow)

Gene Details

vascular endothelial growth factor D precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012474, Cow)

Protein Percentage 94.09%
cDNA percentage 93.48%
Ka/Ks Ratio 0.16152 (Ka = 0.0314, Ks = 0.1942)

FIGF  (Minke Whale)

Gene Details

c-fos induced growth factor (vascular endothelial growth factor D)

External Links

Gene match (Identifier: BACU005290, Minke Whale)

Protein Percentage 99.09%
cDNA percentage 99.09%
Ka/Ks Ratio 0.25772 (Ka = 0.0058, Ks = 0.0225)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 663 bp    Location:2655970..2671614   Strand:+
>bmy_01276
ATGTTAGAACAATCTGAGCAGCAGATTAGGGCAGCTTCGGGTTTGGAGGAACTACTGCAGATCACCCACTTCGAGGACTGGAAGCTTTGGAGATGCCGACTGAAGCTCAAAAGTCTCACCGGCGCGGACTCTCGCTCAGCATCCCATCGGTCCACCAGGTTTGCGGCCACTTTCTATGACATTGAGACGCTAAAAGTTATAGATGAGGAATGGCAAAGGACGCAGTGCAGCCCTCGAGAGACGTGCGTGGAGGTGGCCAGCGAGCTGGGGAGAAGCACTGACACGTTCTTCAAGCCCCCCTGCGTGAACGTGTTCCGGTGTGGCGGCTGCTGCAATGAAGAGAGCCTCGTGTGTGTCAACAGCAGCACCTCGTACGTTTCCAAACAGCTCTTTGAGATATCAGTACCTTTGACAAGAGTACCTGAATTAGTGCCTGTTAAAGTTGCCAACCATACAGGTTGTAAGTGCTTGCCAACAGCTCCCCGCCATCCGTACTCGATTATTAGAAGATCCATCCAGATCCCAGAAGAAGATCGCTGTGAGGACAGATGCCCCTTTCACATGAGAACCTGTGCAAATGGAAAACCAGCATGTCCAAAGCATTGCCGCTTTCCAAAGGAGAAAAGGGCCTCCCATGGGCTCCACGATCGAGAAAATCCTTGA

Related Sequences

bmy_01276T0 Protein

Length: 221 aa      View alignments
>bmy_01276T0
MLEQSEQQIRAASGLEELLQITHFEDWKLWRCRLKLKSLTGADSRSASHRSTRFAATFYDIETLKVIDEEWQRTQCSPRETCVEVASELGRSTDTFFKPPCVNVFRCGGCCNEESLVCVNSSTSYVSKQLFEISVPLTRVPELVPVKVANHTGCKCLPTAPRHPYSIIRRSIQIPEEDRCEDRCPFHMRTCANGKPACPKHCRFPKEKRASHGLHDRENP*