Part of scaffold_28 (Scaffold)

For more information consult the page for scaffold_28 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TSKU ENSBTAG00000001537 (Cow)

Gene Details

tsukushin precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002011, Cow)

Protein Percentage 58.43%
cDNA percentage 67.73%
Ka/Ks Ratio 0.23106 (Ka = 0.3552, Ks = 1.5375)

TSKU  (Minke Whale)

Gene Details

tsukushi, small leucine rich proteoglycan

External Links

Gene match (Identifier: BACU012503, Minke Whale)

Protein Percentage 97.17%
cDNA percentage 97.73%
Ka/Ks Ratio 0.12897 (Ka = 0.0117, Ks = 0.0904)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1104 bp    Location:170240..161176   Strand:-
>bmy_01301
ATGGAGCAGCCGGTGGAGACAGAGCCCGTCTCAGCCCACACCATGCTGTGGCCCCTGCTGCTGTTGCTGGCCGCCGGTGAGGCCCAGACGACCCGGCCCTGCTTCCCTGGATGCCAGTGTGAAGTGGAGACCTTTGGCCTCTTCGACAGCTTCAGCCTGACGCGGGTGGATTGCAGCAGCCTGGGCCCTCACATCGTGCCCGTGCCCATCCCCCTGGACACAGCCCACCTGGACCTGTCCTCCAACCGGCTGGAGACGGTGAACGAGTCCGTGCTGGCAGGCCCGGGTTACACCACGCTGGCCGGCCTGGATCTCAGCCACAACCTGCTCACCAGCCTCTCACCCACGGCCTTCTCCCGCCTTCGCTACCTGGAGTCGCTTGACCTCAGCCACAACGGCCTGGCCGCCCTGCCCGCCGAGAGCTTCACCAGCTCGCCCCTGAGCGACGTGAACCTGAGCCACAACCGGCTCCGCGAGGTCTCCGTGTCCGCCTTCGCCACCCACAGCCCGGCCAGGGCGCTGCACGTGGACCTCTCGCACAACCTCCTCCACCGCCTCGTGCCCCACCCCGCGCGGGCCAGCCTGCCGGCGCCCACCATTCAGAGCCTGAACCTGGCCTGGAATCGGCTCCACACCGTGCCCGACCTCCGGGACTTGCCCCTGCGCTACCTGAGCTTGGACGGGAACCCATTGGCGGCCATCGGCCCAGGGGCCTTCGAGGGGCTGGCGGGCCTTACACACCTGTCGCTGGGCAGCCTACAGCGTCTCCCCCAGCTGGCGCCCTATGGCTTCCGTGAGCTGCAGGGCCTGCAGGTCCTGGATTTGTCAAGCAACCCCAAGCTCAAGTGGGCAGGACCCGAGGTGTTCTCAGGCCTGGGCTCCCTGCAGGAGCTGGACCTGTCAGGCACAGGCCTGGTGCCCCTGCCCGAGAAGCTGCTCCTCCACCTCCCAGCGCTGCAGAGCATCAGCGTGGGCCAGGGCGTGCAGTGCCGGCGCCTGGTGCGGGAGGGCACCTACCCCAGGCAGCCTGGCTCCACCCCCAAGGTGGCCCTGCACTGCATAGACACCCAGGAATTAGCTGCCGGGGGCTCTGATACCTTGTGA

Related Sequences

bmy_01301T0 Protein

Length: 368 aa      View alignments
>bmy_01301T0
MEQPVETEPVSAHTMLWPLLLLLAAGEAQTTRPCFPGCQCEVETFGLFDSFSLTRVDCSSLGPHIVPVPIPLDTAHLDLSSNRLETVNESVLAGPGYTTLAGLDLSHNLLTSLSPTAFSRLRYLESLDLSHNGLAALPAESFTSSPLSDVNLSHNRLREVSVSAFATHSPARALHVDLSHNLLHRLVPHPARASLPAPTIQSLNLAWNRLHTVPDLRDLPLRYLSLDGNPLAAIGPGAFEGLAGLTHLSLGSLQRLPQLAPYGFRELQGLQVLDLSSNPKLKWAGPEVFSGLGSLQELDLSGTGLVPLPEKLLLHLPALQSISVGQGVQCRRLVREGTYPRQPGSTPKVALHCIDTQELAAGGSDTL*