Part of scaffold_28 (Scaffold)

For more information consult the page for scaffold_28 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GDPD5 ENSTTRG00000005863 (Bottlenosed dolphin)

Gene Details

glycerophosphodiester phosphodiesterase domain containing 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005544, Bottlenosed dolphin)

Protein Percentage 91.73%
cDNA percentage 93.75%
Ka/Ks Ratio 0.28855 (Ka = 0.0421, Ks = 0.1458)

GDPD5 ENSBTAG00000031777 (Cow)

Gene Details

glycerophosphodiester phosphodiesterase domain-containing protein 5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020079, Cow)

Protein Percentage 91.35%
cDNA percentage 90.95%
Ka/Ks Ratio 0.11329 (Ka = 0.0469, Ks = 0.4139)

GDPD5  (Minke Whale)

Gene Details

glycerophosphodiester phosphodiesterase domain containing 5

External Links

Gene match (Identifier: BACU015935, Minke Whale)

Protein Percentage 94.37%
cDNA percentage 95.17%
Ka/Ks Ratio 0.27244 (Ka = 0.0354, Ks = 0.1299)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1524 bp    Location:1421871..1438094   Strand:+
>bmy_01313
ACACACTGGGGACCCTTGGGCCGATGGGGCTCTGATGCTGCCCTGACCCTCTGGTGGCTCTTCCCCTTCCAGATAGGGCTGGTGGTCATCCTGGTGGCTACAGTGGTGGCCATGTCAGCTGTGGCCCAGCTGTGGGAGGACGAGTGGGAGGTGCTGCTGATCTCCCTGCAGCAGTCTCTCTTGCCCCTTCCTGCACACAAGGGCACAGCGCCGTTCCTGCACGTGGGGGCCCTGGTCGCCGTGACTGCGCTCTCCTGGATCGTGGCAGGACAGTTTGCCCGTGCAGAGCGATCCTCCTCCCAGATGGCCATTCTCAGTACCTTCTTCACCGTGGTGTTTGCCCTCTACCTGGCCCCTCTCACCATCTCCTCTCCCTGCATCATGGAGAAAAAGGACCTGGGTCCCAAACCTGCCCTCATCGGCCACCGCGGGGCCCCCATGCTGGCCCCAGAGCACACGCTGATGTCCTTCAGGAAGGCCCTAGAGCAGAAGCTGTATGGACTCCAGGCTGACGTCACCATCAGCCTGGACGGCGTGCCCTTCCTCATGCACGACACCACCCTGCGCCGCACCACCAACGTGGAGGAGGAATTCCCGGAGCTCGCCCGCAGGCCCGCCTCCATGCTCAACTGGACCCTGCTGCAGAGGCTCAATGCTGGCCAGTGGTTCCTGAAGACGGACCCCTTCTGGACGGCCAGCTCCCTGTCACCATCCGACCACAGGGAGGCCCAAAACCAGTCCATCTGCAGCCTAATGGAACTCTTGGAGCTGGCCAAGGGCAATGCCACACTGCTGCTCAACCTGCGTGACCCGCCGCGGGAGCACCCCTACCGCGGCAGCTTCCTCAACGTCACGCTGGAGGCCCTGCTGCGCTCGGGCTTCCCCCAGCACCAGGTGAGGCCCTGCAGCCCAAAGGTGGCTCCTGGCTTTCAGCAGACATCGGGCTCCAAGGAGGCAGCTGCCAGCCTGCGGAGAGGCCACATCCAGTGGCTGAACCTGCGCTACACTCAGGTGTCCCGCCAGGAGCTCAGGGACTATGCATCCTGGAACCTGAGCGTGAACCTCTACACGGTCAATGCCCCGTGGCTCTTCTCCCTGCTGTGGTGCGCGGGGGTCCCGTCTGTCACCTCTGACAACTCCCACACCTTATCCCAGGTGCCCTCCCCCCTCTGGATCATGCCCCCGGACGAGTACTGTCTCATGTGGGTCACCGCCGACCTGATCTCCTTCATCCTGATCGTTGGCATCTTCGTGCTGCAGAAGTGGCGCCTGGGTGGCATACGGAGCTACAACCCCGAGCAGATCATGCTGAGTGCCGCGGTGCACCGGACCAGCCGGGACGTCAGCATCATGAAGGAGAAGCTCATCTTTTCAGAGATCAGCGATGGCATGGAGGTCTCCGATGAGCTCTCTGTATGTTCAGACAACAGTTATGACACATATGCCAACAGCACCACCTCCCCTATGGGCCCCCAAGGGAGCGGCAGCCACGCCACGACCCTCACAGACCGGAGTGGGCGTTAG

Related Sequences

bmy_01313T0 Protein

Length: 508 aa      View alignments
>bmy_01313T0
THWGPLGRWGSDAALTLWWLFPFQIGLVVILVATVVAMSAVAQLWEDEWEVLLISLQQSLLPLPAHKGTAPFLHVGALVAVTALSWIVAGQFARAERSSSQMAILSTFFTVVFALYLAPLTISSPCIMEKKDLGPKPALIGHRGAPMLAPEHTLMSFRKALEQKLYGLQADVTISLDGVPFLMHDTTLRRTTNVEEEFPELARRPASMLNWTLLQRLNAGQWFLKTDPFWTASSLSPSDHREAQNQSICSLMELLELAKGNATLLLNLRDPPREHPYRGSFLNVTLEALLRSGFPQHQVRPCSPKVAPGFQQTSGSKEAAASLRRGHIQWLNLRYTQVSRQELRDYASWNLSVNLYTVNAPWLFSLLWCAGVPSVTSDNSHTLSQVPSPLWIMPPDEYCLMWVTADLISFILIVGIFVLQKWRLGGIRSYNPEQIMLSAAVHRTSRDVSIMKEKLIFSEISDGMEVSDELSVCSDNSYDTYANSTTSPMGPQGSGSHATTLTDRSGR*