Sequence detailsbmy_01323 (Coding sequence)

Part of scaffold_28 (SequenceType object (1))

For more information consult the page for scaffold_28 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RNF169ENSTTRG00000005774 (Bottlenosed dolphin)

Gene Details

ring finger protein 169

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005471, Bottlenosed dolphin)

Protein Percentage 79.71%
cDNA percentage 80.91%
Ka/Ks Ratio 0.43542 (Ka = 0.0175, Ks = 0.0402)

RNF169ENSBTAG00000000727 (Cow)

Gene Details

E3 ubiquitin-protein ligase RNF169

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000000969, Cow)

Protein Percentage 92.18%
cDNA percentage 92.65%
Ka/Ks Ratio 0.20968 (Ka = 0.0394, Ks = 0.1878)

RNF169 (Minke Whale)

Gene Details

ring finger protein 169

External Links

Gene match (Identifier: BACU019065, Minke Whale)

Protein Percentage 97.63%
cDNA percentage 98.42%
Ka/Ks Ratio 0.46583 (Ka = 0.0118, Ks = 0.0254)

Additional orthologs identified in other species via the OPTIC pipeline.

RNF169 (Human)   Rnf169 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1269 bp    Location:1911585..1904888   Strand:-
Raw sequence 
>bmy_01323
ATGGAAAGGAGTCAGAGCTGCAGTGACACTGGTCAGGACAGAGTGAAGGGCAGACTGAGAGCAGCCCCGACCAGCAAAGCCAAGGCCACAACCATGACCCCAGCCTCCAACCCTATCATTGGCGTCCTCTTGTCCACCCAAAACAACCGCTGCCTCTCGGCCCCTGACTTAACCATTGAAAAGCGTCTGCCCTTCAGCTCCCTCTCATCCTTGGCTTCCTTGCATAAGCCAGAGCGCTCCATCAGCCCTGAGAGCAACGACAGCATCTCTGAAGAACTAAACCATTTCAAGCCCATTGTCTGCTCACCGTGTACTCCTCCCAAGAGACTCCCTGATGGCCGTGTACTGAGTCCCCTCATCATCAAATCAACACCCCGCAACCTAAACAGAAGCCTGCAGAAGCAGACTTCTTATGAGGCCAGTCCACGGATCCTCAAAAAGTGGGAACAGATCTTTCAGGAGCGACAGATCAAAAAGACCCTTTCGAAAGCCACCCTCACCTCCCTGGCTCCAGAAACAGGGGAAGACTTACTCGTCACTGAAGTTACCCATTCTAGCAAGGAGAAGCCACTTCTGGCTTTAAATACAAGACTGTCCAGTGGGCAAGTACTCTCTGACTATACAGGACCTACCCCCACTGACCTTGATTATTTCCCCTCTGTTAGCCAGACAAAAGCAGAACAGGGCGGTGACAGTAAAAGGAGCACTGAGATCCCATTAGAAACCTGCTGTTCTTCAGAGCTCAAAGTGGGAGCCAGTGGGACTTCTTTGGAGAGAGAGCAGTTTGAAGGGTCAGGGCCATCCCCAGATGCCAAGTTAGATAAAACCTGTATAACGACAACTATGAAAATCTCAGCAGTTAATTCAGTGCTACCTAAAAACAGTGTTTTGGGCGGGGTCCTCAAAACAAAGAAACAGCTGAAGACAGTGAATCATTTTGATCTGCCTAACGGTGTTCTGGCAGACAACCTAGGTGAGGAGCCACTTCCTTCCTTGCGTCGGGGCAGGAAAAGACGCTGTAAGACCAAGCACTTGGAACAAAATGGCTCCCTTAAGAAACTGCGACAAAGCAGTGGTGAGGTGGGTCTGGCCCCAGCAGACCCAGTACTGCGAGAGATGGAGCAGAAATTGCAGCAAGAGGAAGAGGACCGGCAGCTCGCTCTGCACTTGCAGCGCGTGTTTGACAGTGAGAGGCGGACTGTGAGTCGGCGGAAAGGAAGCGTGGATCAGTACCTCTTGCGGTCCAGTAGCATGGCTGGGGCCAAGTAG

Related Sequences

bmy_01323T0 SequenceType object (3)

Length: 423 aa      View alignments
>bmy_01323T0
MERSQSCSDTGQDRVKGRLRAAPTSKAKATTMTPASNPIIGVLLSTQNNRCLSAPDLTIEKRLPFSSLSSLASLHKPERSISPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVLSPLIIKSTPRNLNRSLQKQTSYEASPRILKKWEQIFQERQIKKTLSKATLTSLAPETGEDLLVTEVTHSSKEKPLLALNTRLSSGQVLSDYTGPTPTDLDYFPSVSQTKAEQGGDSKRSTEIPLETCCSSELKVGASGTSLEREQFEGSGPSPDAKLDKTCITTTMKISAVNSVLPKNSVLGGVLKTKKQLKTVNHFDLPNGVLADNLGEEPLPSLRRGRKRRCKTKHLEQNGSLKKLRQSSGEVGLAPADPVLREMEQKLQQEEEDRQLALHLQRVFDSERRTVSRRKGSVDQYLLRSSSMAGAK*