Part of scaffold_28 (Scaffold)

For more information consult the page for scaffold_28 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PAAF1 ENSTTRG00000005417 (Bottlenosed dolphin)

Gene Details

proteasomal ATPase-associated factor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005113, Bottlenosed dolphin)

Protein Percentage 71.12%
cDNA percentage 73.76%
Ka/Ks Ratio 1.04685 (Ka = 0.1111, Ks = 0.1062)

PAAF1 ENSBTAG00000003679 (Cow)

Gene Details

Proteasomal ATPase-associated factor 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004794, Cow)

Protein Percentage 82.37%
cDNA percentage 83.89%
Ka/Ks Ratio 0.44872 (Ka = 0.1405, Ks = 0.313)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 990 bp    Location:2739737..2715768   Strand:-
>bmy_01340
ATGATAACTCAGCCTTCATATGAAACACATGTCCTTTGTGTTGGGAAGCATAGGCTTGAAGAAGTCTTASAGGAGTGTGAAATGAGAAAGGTTTATAACATATTTCAAGGGAAGAAGAGCATTTCGTTATTTGTAACACTGGTTGTTTTGTCGTTTAAACAGATAACATGCCTGGACATTTCCAGTGGAGGAGGCCTTGGTGTGTCTTCTAGTACCGATGGGAGCATGAAGATCTGGCAGGCTTCCAATGGAGAGCTCAGAAGAGTATTGGAAGGACATGTATTTGATGTGAATTGTTGCAGGTTTTTCCCATCAGGCCTTGTGGTTCTGAGTGGGGGAATGGATGCCCAGCTGAAGATCTGGTCAGCTGAAGATGCTAGCTGTGTGGTGACCTTCAAAGGTCACAAAGGAGGTATCCTGGATACAGCCATTGTTGATCGGGGGAGGAATGTGGTATCTGGTTCTCGAGACGGGACAGCACGACTTTGGGACTGTGGGCGCTCAGCCTGCTTGGGAGTCATTGCAGACTGTGGGTCTTCCATCAACGGAGTGGCTGTGGGTACTGCTGACAACTCTATAAACCTCGGCTCCCCTGAGCAGATGCCCAGCGAACGGGAGGTTGGAACAGAGTCGAAAATGCTGCTGTTGGCCCGAGAAGATAAGAAACTTCAGTGTTCCTCTTTATTGGCTCAGATGCCTTCAACTGCTGATGGAAACATTTATCAGCTGGATGTGAGGAGTCCAAGGGCTCCAGTACAAGTCATCCACAGATCAGGAGCACCAGTTATGTCCCTGCTGAGTTTCAGAGACGGATTCATTGCTAGTCAAGGTGATGGAAGCTGTTTCATTGTCCAGCAAGACTTAGACTATGTCATTGAGCTCACTGGGGCTGACTGTGACCCTGTGTACAAGGTAGCCACATGGGAGAAGCAGATCTACACGTGTTGTCGAGATGGTCTTGTGCGACGCTATCAGCTCTCTGACCTCTGA

Related Sequences

bmy_01340T0 Protein

Length: 330 aa     
>bmy_01340T0
MITQPSYETHVLCVGKHRLEEVLZECEMRKVYNIFQGKKSISLFVTLVVLSFKQITCLDISSGGGLGVSSSTDGSMKIWQASNGELRRVLEGHVFDVNCCRFFPSGLVVLSGGMDAQLKIWSAEDASCVVTFKGHKGGILDTAIVDRGRNVVSGSRDGTARLWDCGRSACLGVIADCGSSINGVAVGTADNSINLGSPEQMPSEREVGTESKMLLLAREDKKLQCSSLLAQMPSTADGNIYQLDVRSPRAPVQVIHRSGAPVMSLLSFRDGFIASQGDGSCFIVQQDLDYVIELTGADCDPVYKVATWEKQIYTCCRDGLVRRYQLSDL*