Part of scaffold_29 (Scaffold)

For more information consult the page for scaffold_29 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TTPA ENSTTRG00000009620 (Bottlenosed dolphin)

Gene Details

tocopherol (alpha) transfer protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009102, Bottlenosed dolphin)

Protein Percentage 94.34%
cDNA percentage 96.54%
Ka/Ks Ratio 0.48987 (Ka = 0.028, Ks = 0.0571)

TTPA ENSBTAG00000022471 (Cow)

Gene Details

alpha-tocopherol transfer protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000030408, Cow)

Protein Percentage 91.49%
cDNA percentage 92.79%
Ka/Ks Ratio 0.26431 (Ka = 0.0438, Ks = 0.1658)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 852 bp    Location:1785513..1804887   Strand:+
>bmy_01350
ATGGCGGAGGCGCGGCCGGGGCCGGCGGCTGGGGCGCAGCTCAACGGGCTGCCCGACCACTCGCCGCTGCTGCAGCCCAGCCTGGCCGAGCTGCGGCGCCGGGCCGGGGAGGCGGGCGCTCGGCCGGCGCGGCGGCCGCTCAGCGACGCCTTCCTGCTGCGGTTCCTGCGCGCCCGGGACTTCGATCTGGACCTGGCCTGGCAGTTACTAAAAAACTACTATAAGTGGAGAGAAGAGTGTCCAGAAGTAAGTGCAGATCTCCATCCTAGAAGCATTCTTGGCCTTCTGAAGGCCGGCTACATCGGCGTCCTGAGAGCCCGAGACCCCACCGGCAGCAAAGTTCTGATTTACAGAATTGCACACTGGGACCCAAAAGTTTTCACAGCTTATGATGTGTTTCGTGTAAGTCTAATCACATCCGAGCTTCTTGTACAGGAGGTAGAAACACAACGGAATGGAATCAAGGCTATCTTTGATTTGGAAGGCTGGCAGTTTTCTCATGCTTTTCAAATTACTCCGTCTGTAGCCAGGAAGATTGCCGCTGTTCTTACAGATTCCTTTCCATTAAAAGTTCGTGGTATCCATTTGATAAATGAGCCAATAATTTTCCATGCTGTTTTTTCCATGATTAAACCATTTCTGACCGAAAAAATTAAGGAACGGATTCATATGCATGGGGACAATTACAAACAAAGTTTACTTCAGCATTTCCCAGACATTCTTCCAGTGGAATACGGTGGTGAAGAATACTCCATGGAGGACATTTGTCAGGAGTGGACAAATTTTATAATGAAGTCTGAAAATTATCTCAGCAGCATTTCACAGACCGTTAAAGGAGAAGAAGTTATTTAA

Related Sequences

bmy_01350T0 Protein

Length: 284 aa      View alignments
>bmy_01350T0
MAEARPGPAAGAQLNGLPDHSPLLQPSLAELRRRAGEAGARPARRPLSDAFLLRFLRARDFDLDLAWQLLKNYYKWREECPEVSADLHPRSILGLLKAGYIGVLRARDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELLVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVARKIAAVLTDSFPLKVRGIHLINEPIIFHAVFSMIKPFLTEKIKERIHMHGDNYKQSLLQHFPDILPVEYGGEEYSMEDICQEWTNFIMKSENYLSSISQTVKGEEVI*