Part of scaffold_31 (Scaffold)

For more information consult the page for scaffold_31 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLRN3 ENSTTRG00000004871 (Bottlenosed dolphin)

Gene Details

clarin 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004584, Bottlenosed dolphin)

Protein Percentage 88.21%
cDNA percentage 94.03%
Ka/Ks Ratio 1.11706 (Ka = 0.066, Ks = 0.0591)

CLRN3 ENSBTAG00000047054 (Cow)

Gene Details

clarin-3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000055846, Cow)

Protein Percentage 82.53%
cDNA percentage 86.03%
Ka/Ks Ratio 0.25175 (Ka = 0.096, Ks = 0.3812)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 738 bp    Location:2345131..2359835   Strand:+
>bmy_01368
ATGCCTACGGCAACGAAAAGTTTGATGTTCTTATCCAGCTTTGTCACAAGCTTGGGGGCTTCCATCGTAATTTGTTCTATTCTTACAACTCAAGAATGGATCCGCAGTACAGTTGTCATTAGTGACCCTTCTTCGAATGGTAGTGTGATTATCACCTACGGACTCTTTCGTGGGAAGAGTATTCAAGAATTGAATCATGGACTTGCAGAATCAGACAAAAATTTTGAAGAGTTGGTCTTTGCATTTGGTGCCACGTACTTACCAAACATTGCTTTAGTTTTAGGGACGTTGAACAATTCTTCCCCAAAGACTCTGCACTTGGTGGTCATCCTGTTCCTGGTCCTCAGTTTGTTGACTTCGCTGTTGAGCTCTGGGTTCACCTTCTACAACGGCGTCAGCAACCCCTATCAGACGTTCTTGGGACCGATGGGGGTGTACACCTGGAGCGGACTCAGCGCATCCTTCATATTCATAACCATGGTGCTCTTTGTGGGAAACACACAATCCAATCACCTCTCAGAAGAGCTGGCCCAGAGGCTCTACCCACTTTATCCGGCAGCCAGTCACCGAGGAGCCTCCCACAGTTACGGATACTCATTCTGGCTCTCCCTGCTCGTCATTCTTCTAAACATGGTCACCGTGGTCATCATCATCTTCTACCAGAAGGCCAGACACCAGAGGAAGCAGGAGCAGAAAAAGCCCATGGAATATGCCCCAAGGGATGGAATTTTATTCTGA

Related Sequences

bmy_01368T0 Protein

Length: 246 aa      View alignments
>bmy_01368T0
MPTATKSLMFLSSFVTSLGASIVICSILTTQEWIRSTVVISDPSSNGSVIITYGLFRGKSIQELNHGLAESDKNFEELVFAFGATYLPNIALVLGTLNNSSPKTLHLVVILFLVLSLLTSLLSSGFTFYNGVSNPYQTFLGPMGVYTWSGLSASFIFITMVLFVGNTQSNHLSEELAQRLYPLYPAASHRGASHSYGYSFWLSLLVILLNMVTVVIIIFYQKARHQRKQEQKKPMEYAPRDGILF*