Sequence detailsbmy_01387 (Coding sequence)

Part of scaffold_32 (SequenceType object (1))

For more information consult the page for scaffold_32 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NALCNENSTTRG00000006784 (Bottlenosed dolphin)

Gene Details

sodium leak channel, non-selective

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006420, Bottlenosed dolphin)

Protein Percentage 86.17%
cDNA percentage 86.31%
Ka/Ks Ratio 0.32394 (Ka = 0.0664, Ks = 0.205)

NALCNENSBTAG00000037786 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000053801, Cow)

Protein Percentage 86.7%
cDNA percentage 85.67%
Ka/Ks Ratio 0.22435 (Ka = 0.0955, Ks = 0.4255)

NALCN (Minke Whale)

Gene Details

sodium leak channel, non-selective

External Links

Gene match (Identifier: BACU017441, Minke Whale)

Protein Percentage 89.6%
cDNA percentage 90.46%
Ka/Ks Ratio 0.4056 (Ka = 0.0779, Ks = 0.1921)

Additional orthologs identified in other species via the OPTIC pipeline.

NALCN (Human)   Nalcn (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3408 bp    Location:2290112..2343249   Strand:+
Raw sequence 
>bmy_01387
ATGAAGACAGAGACTGTTGGCCTTGGTTTTGGTACCAGATCTGGGGGTGAGGTGCTGGGGTGTGGGTCTGGCACAGGGGGTCAGAGAGTCACATTGAGCCTGAGGGTCCAAAGGGGACCATTAACACCCCAGCGAGAGGGCCCCACCTGCCTGATTTCACCCTGCTCAGATCACAGGGCACCTTGTTACCCCAGGGAAGGAGGAGACCCAACAGAAAAGAGAGAGCTGATCTTGAAGCAAAGAGGAAAAGAGGGGTTGCTTTCTCACCCCAACTTCAGCCACGCTATTGGTGGAGGAGATGGAAGAGGAGGTGTCATAGGGCAACTTAAAGCCAGTTACATTCTATATACTTCAAGCATAGCAGGGACACCCAACTCAAATGGAGCTTGCACTCGACAGCGCATGCTGAGCGGATCATTTGAGGGGCAGCCGGCCAAGGAAAGGTCAATTCTCAGTGTGCAGCACCACATCCGCCAAGAGCGCAGGTCACTAAGACACGGATCAAACAGCCAGAGGATCAGCAGGGGGAAATCTCTTGAAACTCTGACTCAAGATCATTCCAATACAGTGAGATATAGAAATGCACAAAGAGAAGACAGTGAAATAAAGATGATCCAGGAGAAAAAGGAGCAAGCAGAAATGAAAAGGAAAGTGCAGGAAGAGGAGCTGAGGGAGAACCACCCGTACTTCGATAAGCCCCTGTTCATCGTGGGTCGGGAGCACAGGTTCAGAAACTTCTGCCGAGTGGTGGTCCGAGCTCGATTCAACGCATCTAAAACAGATCCGGTCACGGGAGCTGTGAAAAATACAAAGTACCATCAACTTTATGATTTGCTGGGATTGGTGACTTACCTGGACTGGGTCATGATTATCGTAACCATTTGCTCCTGCATTTCCATGATGTTCGAATCCCCCTTCCGGAGAGTCATGCACGCACCTACTTTGCAGATCGCCGAGTATGTGTTTGTGATATTCATGAGCATTGAGCTTAATCTGAAGATTATGGCAGATGGCTTATTTTTCACTCCAACTGCTGTCATCAGGGACTTTGGTGGAGTCATGGACATATTTATATATCTTGTGAGCTTGATATTCCTTTGTTGGATGCCTCAAAACGTGCCTGCGGAGTCGGGAGCTCAGCTCTTACTTGTTCTCCGCTGCCTGCGACCTCTGCGGATATTCAAGCTGGTGCCTCAGATGAGGAAAGTTGTTCGAGAACTTTTCAGCGGCTTCAAGGAAATTTTTCTGGTCTCCATTCTTTTGCTGACATTAATGCTTGTTTTTGCAAGCTTTGGAGTTCAGCTCTTTGCTGGAAAACTGGCCAAGTGCAACGATCCCAACATTATTAGAAGGGAAGATTGTAATGGAATATTCAGAATTAATGTAAGTGTGTCCAAGAACTTAAATTTAAAATTAAGACCTGGAGAGAAAAAACCTGGATTTTGGGTGCCCCGTGTTTGGGCGAATCCTCGGAACTTTAATTTTGACAATGTGGGCAATGCTATGCTGGCATTGTTTGAAGTTCTCTCCTTGAAAGGCTGGGTGGAAGTGAGGGATGTTATTATTCATCGTGTGGGTCCGATGCATGGAATCTATATTCATGTTTTTGTATTCCTGGGTTGCATGATTGGACTGACCCTTTTTGTTGGAGTAGTTATTGCTAATTTCAATGAAAACAAGGGGACGGCTCTGCTGACTGTAGATCAGAGAAGATGGGAAGATTTGAAGAGCCGCCTGAAGATAGCACAGCCTCTTCATCTACCACCTCGCCCGGATAACGATGGTTTTAGAGCTAAGATGTATGACATAACCCAGCATCCATTTTTTAAGAGGACAATTGCATTACTCGTCCTGGCCCAGTCGGTGTTGCTGTCCGTCAAGTGGGACGTCGAGGACCCAGTGACTGTTCCTTTGGCAACCATGTCGGTTGTTTTCACGTTCATCTTTGTTCTGGAGGTTACAATGAAGATCATAGCGATGTCACCTGCTGGCTTCTGGCAAAGCAGAAGAAATAGGTACGATCTTCTGGTGACGTCACTTGGCGTTGTCTGGGTGGTACTTCACTTTGCCCTACTGAACGCGTACACCTACATGATGGGTGCGTGTGTGATTGTCTTCCGGTTTTTCTCTATCTGCGGGAAGCATGTAACACTAAAGATGCTTCTCCTGACAGTGGTCGTCAGCATGTATAAAAGCTTCTTTATCATAGTGGGGATGTTCCTATTGCTGCTGTGTTATGCGTTTGCTGGAGTTGTCTTATTTGGTACTGTGAAATATGGAGAGAACATTAACAGGCATGCAAACTTTTCTTCAGCTGGCAAAGCTATTACCGTACTGTTCCGAATTGTCACAGGAGAAGATTGGAACAAGATTATGCATGACTGCATGGTCCAGCCCCCGTTTTGTACTCCAGATGAATTTACATACTGGGCAACAGACTGTGGGAATTATGCTGGGGCACTTATGTATTTCTGTTCATTTTATGTCATCATTGCCTACATCATGCTAAATCTGCTTGTAGCCATAATCGTGGAGAATTTCTCCTTGTTTTATTCCACTGAGGAGGACCAGCTTTTAAGTTACAACGATCTTCGCCACTTTCAAATCATATGGAACATGGTGGATGATAAAAGAGAGGGGGTGATCCCGACTTTCCGCGTGAAGTTCCTGCTGCGGCTTCTGCGGGGGAGGCTGGAGGTGGACCTGGACAAGGACAAGCTTCTGTTCAAGCACATGTGCTACGAGATGGAGAGGCTGCACAACGGCGGTGATGTCACCTTCCACGACGTGCTCAGCATGCTCTCCTACCGGTCAGTTGACATCCGGAAGAGTCTGCAGCTGGAGGAGCTGCTCGCGCGGGAGCAGCTGGAGTACACCATCGAGGAGGAGGTGGCCAAGCAGACCATCCGCATGTGGCTGAAGAAGTGCTTGAAGCGCATCAGGGCCAAACAGCAGCAGTCCTGCAGCATCATCCACAGCCTGAGAGAGAGCCAACAGCAGGAGCTGAGCCGGTTTCTGAACCCGCCCAGTATTGAGACCACGCAGCCCAGTGAGGACCTGAACGCCAACAGTCAGGATAACAACATGCAGCCCGAGACGAGCAGCCGGCAGCGGCTTCTGAGCCCCACGCTGTCGGACCGGGGAGCCAGCCGGCAGGACGCGGCCGAGGCCGGGAAGCCCCAGAGGAAGTTCGGCCAATGGCGCCTGCCCTCGGCACCAAAACCAATAAGCCACTCGGTGTCTTCGGTCAACTTACGGTTTGGAGGGCGGRCCACAATGAAATCTGTCGTGTGCAAAATGAACCCCATGACAGACACAGCTTCCTGTGGTTCCGAGGTTAAGAAGTGGTGGACTCGGCAGCTGACAGTGGAGAGCGACGAAAGCGGAGATGACCTTCTGGACATTTAG

Related Sequences

bmy_01387T0 SequenceType object (3)

Length: 1136 aa      View alignments
>bmy_01387T0
MKTETVGLGFGTRSGGEVLGCGSGTGGQRVTLSLRVQRGPLTPQREGPTCLISPCSDHRAPCYPREGGDPTEKRELILKQRGKEGLLSHPNFSHAIGGGDGRGGVIGQLKASYILYTSSIAGTPNSNGACTRQRMLSGSFEGQPAKERSILSVQHHIRQERRSLRHGSNSQRISRGKSLETLTQDHSNTVRYRNAQREDSEIKMIQEKKEQAEMKRKVQEEELRENHPYFDKPLFIVGREHRFRNFCRVVVRARFNASKTDPVTGAVKNTKYHQLYDLLGLVTYLDWVMIIVTICSCISMMFESPFRRVMHAPTLQIAEYVFVIFMSIELNLKIMADGLFFTPTAVIRDFGGVMDIFIYLVSLIFLCWMPQNVPAESGAQLLLVLRCLRPLRIFKLVPQMRKVVRELFSGFKEIFLVSILLLTLMLVFASFGVQLFAGKLAKCNDPNIIRREDCNGIFRINVSVSKNLNLKLRPGEKKPGFWVPRVWANPRNFNFDNVGNAMLALFEVLSLKGWVEVRDVIIHRVGPMHGIYIHVFVFLGCMIGLTLFVGVVIANFNENKGTALLTVDQRRWEDLKSRLKIAQPLHLPPRPDNDGFRAKMYDITQHPFFKRTIALLVLAQSVLLSVKWDVEDPVTVPLATMSVVFTFIFVLEVTMKIIAMSPAGFWQSRRNRYDLLVTSLGVVWVVLHFALLNAYTYMMGACVIVFRFFSICGKHVTLKMLLLTVVVSMYKSFFIIVGMFLLLLCYAFAGVVLFGTVKYGENINRHANFSSAGKAITVLFRIVTGEDWNKIMHDCMVQPPFCTPDEFTYWATDCGNYAGALMYFCSFYVIIAYIMLNLLVAIIVENFSLFYSTEEDQLLSYNDLRHFQIIWNMVDDKREGVIPTFRVKFLLRLLRGRLEVDLDKDKLLFKHMCYEMERLHNGGDVTFHDVLSMLSYRSVDIRKSLQLEELLAREQLEYTIEEEVAKQTIRMWLKKCLKRIRAKQQQSCSIIHSLRESQQQELSRFLNPPSIETTQPSEDLNANSQDNNMQPETSSRQRLLSPTLSDRGASRQDAAEAGKPQRKFGQWRLPSAPKPISHSVSSVNLRFGGRXTMKSVVCKMNPMTDTASCGSEVKKWWTRQLTVESDESGDDLLDI*