Part of scaffold_32 (Scaffold)

For more information consult the page for scaffold_32 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMTC4 ENSTTRG00000002571 (Bottlenosed dolphin)

Gene Details

transmembrane and tetratricopeptide repeat containing 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002412, Bottlenosed dolphin)

Protein Percentage 91.31%
cDNA percentage 91.11%
Ka/Ks Ratio 0.15209 (Ka = 0.0095, Ks = 0.0626)

TMTC4 ENSBTAG00000007066 (Cow)

Gene Details

transmembrane and TPR repeat-containing protein 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023929, Cow)

Protein Percentage 94.55%
cDNA percentage 91.45%
Ka/Ks Ratio 0.08835 (Ka = 0.0269, Ks = 0.3043)

TMTC4  (Minke Whale)

Gene Details

transmembrane and tetratricopeptide repeat containing 4

External Links

Gene match (Identifier: BACU017442, Minke Whale)

Protein Percentage 99.6%
cDNA percentage 98.86%
Ka/Ks Ratio 0.06142 (Ka = 0.002, Ks = 0.0333)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1533 bp    Location:2662637..2689456   Strand:+
>bmy_01388
ATGGTCCGGAAGGTACTACGTAAGGACAAATCATTAGAGAACACTGGCGTACTCAGGACTGAGGGCCTCCTCTTCAGAATGAGTCTCCTGGCCTTGGGGGGAACAGGGGTGCTCTACGTGCGCTGGAAGATCATGGGCACCGGCCCGCCGGCCTTCACCGAGGTCGACAACCCTGCCTCCTTTGCCAGTAGCATGCTGGTCAGGGCCGTAAACTATAATTACTACTATTCCTTGAATGCCTGGTTGCTGCTGTGCCCCTGGTGGCTGTGTTTTGATTGGTCAATGGGCTGCATCCCCCTCATTAAGTCAGCCGGGGACTGGAGGGCAGTTGCTCTAGCAGCACTCTGGTTCTGCCTAATTGGCCTGATACGCCAAGCCCTGTGCTCTGAAGACAGCCACAAGAGACGGATCCTCACACTGGGCCTGGGATTTCTCATCATCCCATTTCTTCCTGCGAGTAACCTGTTCTTCCGAGTGGGCTTCGTGGTGGCAGAGAGGGTCCTATACCTCCCCAGCGCTGGGTACTGCATGCTGCTGACGTTCGGATTTGGAGTTCTCAGTAAACATACTAAGAAAAAGAAACTGATTGCTGCTTTCGTCCTGGGGATTTTATTCATAAACACGCTGAGATGCGTGATTCGCAGCGGCGCGTGGCGGAGTGAGGAACAGCTTTTCAGAAGCGCCCTGTCTGTGTGTCCTCTCAATGCCAAGGTTCACTACAATGTGGGCAAAAACCTGGCTGATAAAGGCAATCAGACAGCTGCCATTAGATATTACCGGGAAGCTGTGAGATTAAATCCGAAGTACGTTCATGCCATGAATAATCTGGGAAATATCTTAAAAGAAAGGAATGAGCTCCAGGAAGCAGAGGAGCTGCTGTCTTTGGCTGTACAGATACAGCCAGACTTCGCTGCCGCGTGGATGAATTTAGGCATCGTGCAGAACAGCCTGAAACGGTTCCAGGCTGCCGAGCAAAGTTACCGGACGGCGATCAAGCACAGGAGGAAATACCCAGATTGTTACTACAACCTCGGGCGTTTGCTCTTTTTTCAGGGTATTGTTTGTGAATATGCAGATCTCAATCGTCACGTGGATGCGCTGAACGCGTGGAGGAATGCTACCGTGCTGAAGCCAGAGCACAGCCTGGCCTGGAACAACATGATTATCCTCCTTGATAACACAGGTGTGGAGAAGCGATTCGGTAATTTAGCCCAAGCCGAAGCTGTTGGAAGAGAGGCACTGGAATTAATACCTAATGACCACTCTCTGATGTTCTCCTTGGCAAACGTGCTGGGAAAGTCTCAGAAATACAAGGAATCTGAAGCTTTATTCCTCAAAGCAATTAAAGCTCATCCAAATACTGCAAGTTACCATGGCAATTTGGCTGTGCTTTATCATCGTTGGGGACATCTAGACTTGGCCAAAAAACACTATGAGATCTCTCTGCGGCTTGACCCAATGGCATCAGGAACTAAGGAGAATTATGGTCTTCTAAGAAGAAAGCTGGAACAAATGCAAAAGAAAAACGTCTGA

Related Sequences

bmy_01388T0 Protein

Length: 511 aa      View alignments
>bmy_01388T0
MVRKVLRKDKSLENTGVLRTEGLLFRMSLLALGGTGVLYVRWKIMGTGPPAFTEVDNPASFASSMLVRAVNYNYYYSLNAWLLLCPWWLCFDWSMGCIPLIKSAGDWRAVALAALWFCLIGLIRQALCSEDSHKRRILTLGLGFLIIPFLPASNLFFRVGFVVAERVLYLPSAGYCMLLTFGFGVLSKHTKKKKLIAAFVLGILFINTLRCVIRSGAWRSEEQLFRSALSVCPLNAKVHYNVGKNLADKGNQTAAIRYYREAVRLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQPDFAAAWMNLGIVQNSLKRFQAAEQSYRTAIKHRRKYPDCYYNLGRLLFFQGIVCEYADLNRHVDALNAWRNATVLKPEHSLAWNNMIILLDNTGVEKRFGNLAQAEAVGREALELIPNDHSLMFSLANVLGKSQKYKESEALFLKAIKAHPNTASYHGNLAVLYHRWGHLDLAKKHYEISLRLDPMASGTKENYGLLRRKLEQMQKKNV*