Part of scaffold_33 (Scaffold)

For more information consult the page for scaffold_33 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

JMJD1C ENSTTRG00000007180 (Bottlenosed dolphin)

Gene Details

jumonji domain containing 1C

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006797, Bottlenosed dolphin)

Protein Percentage 89.36%
cDNA percentage 90.0%
Ka/Ks Ratio 0.31468 (Ka = 0.0158, Ks = 0.0501)

JMJD1C ENSBTAG00000001573 (Cow)

Gene Details

probable JmjC domain-containing histone demethylation protein 2C

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002067, Cow)

Protein Percentage 94.6%
cDNA percentage 94.67%
Ka/Ks Ratio 0.18243 (Ka = 0.0283, Ks = 0.155)

JMJD1C  (Minke Whale)

Gene Details

jumonji domain containing 1C

External Links

Gene match (Identifier: BACU003427, Minke Whale)

Protein Percentage 99.05%
cDNA percentage 99.21%
Ka/Ks Ratio 0.22014 (Ka = 0.0043, Ks = 0.0196)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 7143 bp    Location:2327063..2282218   Strand:-
>bmy_01405
ATGCAGGAGCAGCAGAGGTGCTTTGAGAGAGAACAGAATGTCAGAGAGTCCAGCGGGGGACCAACAGATTGTGGGAAACCATGTGACTGTGTGATTCACATCTCCAAGGAGAGAGAACCGGACGACATAGACAGCCTAAACCCAGTTCTCAGGGACAACCCGCAACTTCAGGAAGAAGTGAAAGTCTGGGTAAAGGAACAAAAGGTTCAGGAGATTTTTATGCAAGGTCCTTATTCCTTGAATGGATACAGAGTGAGAGTATATAGACAAGACTCTGCCACCCAGTGGTTTACTGGCATAATTACTCATCATGATCTCTTCACTCGCACCATGATCGTTATGAATGATCAGGTACTAGAACCACAGAATGTCGATCCTTCTATGGTTCAAATGACCTTTCTAGATGATGTTGTTCACTCTTTGTTAAAAGGTGAAAATATTGGCATTACATCACGGCGAAGGTCTCGTGCCAGTCAAAATAGCAACACTGTTCACGGTCATTATACACGTGCCCAAGCAAATAGTCCCAGACCAGCAATGAACTCCCAAGCTGCTGTACCAAAACAGAATTCACACCAGCAACAAAGAAATATTCGTCCAAATAAGAGGAAGGGCTCAGATAGCAGTATACCAGATGAAGAGAAGATGAAGGAGGAAAAATATGATTATATAGCACGAGGAGAAAATCCTAAAGGTAAAAACAAACAGGTGATGAACAAAAGAAGGAAACCTGAGGAGGATGAAAAGAAACTAAATATGAAAAGACTACGAACCGACAATGTTTCAGACTTTTCTGAGAGYAGTGACTCAGAAAATTCAAATAAGAGAATAATAAATAATTCCTCAGAGCAGAAGCCAGAGAATGAGTTGAAAAATAAAAACACTTCAAAGATAAATGGAGAAGAAGGAAAATCCCAGAATAATGAGAAGGCAGGAGAAGAGACACTAATAGATAGCCAGCCTCCCTGGGATCAAATACAGGAAGATAAAAAACATGAAGAAACAGAGAAACAGAAGTCGGTTGACTCTCAGCTTCAAGAAAAAATGATTATCCGTTCATCAGAACAGGCCACACTTTCTGATCATAATTCTAACGATTTACTTCTTCAGGAACACAATATGGAGAAAACACATACGGTGGAATTATTACCAAAGGAGAAGTTTGTATCCAGACCACCCACACCAAAATGTGTTATTGATATTACGAATGACACTATTATGGAAAAGGTGGCTCAGGAAAACTCAAGTACCTTTGGCCTTCAGACACTTCAGAAAATGGATCCTGACATTAGTGATTCAAAACATTCAGTCACAAATACAAAATACTTGGAAACAGCAAACCAAGATTCTGACCAGAGCTGGGTCASTGATGTAGTTAAAGTAGATTTAACCCAATCAAATGTTAGGAATGCTTCTTCAGGAAATGAAAACCTGAATATGGAAAAAGAGAAAAATCAGTATGTCTCTTACATATCTTCTCTAAGTGCAGTTTCTGTCACAGAAGATAAGCTGCATAAACGAAGTCCACCCCCAGAAACTATAAAATCTAAACTTAATACTTCAGTAGATGCTCACAAGACAAAATCCAATCCCTCACCTGAAGTTGTTAAACCTAAAATTAACCATTCCCCTGATTCTGTAAAGTCTAAGCCCAATTTTGCAAACAGCCAAACTGCTGGTGAAAGAAGACTGGCAAGTAAGATAGAACATGAGTTATCAAGATGCAGCTTTCATCCGGTTCCTACTAGAGGCAGTACATTAGAAACGACAAAAAGCCCTCTTATCATTGATAAAAATGAGCATTTCACAGTTTACAGAGATCCTGCACTTGTCGGGTCAGATACAGGAGCTAATCACATTTCACCTTTCTTAAGCCAGCATCCTTTTCCTCTTCATTCTTCATCCCATAGAACGTGTTTAAATCCAGGTACCCATCACCCTGCCTTAAGTCCTGCACCCCACTTACTGGCTGGATCATCCAGTCAAACTCCATTACCTACCATTAACACTCATCCTCTGACTAGTGGTCCACACCATTCTGTTCATCACCCTCATTTACTTCCTGCTGTGTTACCTGGAGTGCCTACTGCCTCCTTACTCGGTGGCCACCCACGACTGGAGACTGCTCACGCCAGCAGCTTGAGCCACTTAGCACTAGCACACCAGCAACAGCAACAGTTGTTACAGCACCAGTCACCTCATCTTCTTGGACAAGCCCACCCATCTGCTTCATATAATCAGCTTGGACTTTATCCAATTATTTGGCAATATCCAAATGGAACACATGCATACTCAGGACTTGGTCTGCCTTCTTCTAAGTGGGTTCACCCAGAAAATGCAGTTAATGCTGAATCTTCATTAAGGAGGAATTCTCCCAGTCCTTGGTTACATCAGCCGACCCCTGTGACCTCAGCAGACGGTATTGGATTACTTAGTCACATTCCTGTCAGACCTTCCAGCGCAGAGCCTCATCGGCCTCTTAAAATTACAGCGCATTCCAGTCCACCATTGACAAAATGTTTAGTAGATCGTCATAAAGAAGAATTGGAGAGGAAAGCTTTTATTGAACCATTGCGTTCTGTTGCATCCACATCAGCCAAAAATGACCTGGATCTAAATAGGTCACAGACGGGAAAAGATGGTCACTTGCATAGGCATTTTGTGGATCCTGTATTGAATCAATTACAGAGACCACCCCAGGAGACTGGAGAGAGATTAAACAAATATAAGGAGGAACACCGTCGAATTCTTCAAGAAAGTATTGATGTTGCTCCCTTTACAACTAAAATCAAGGGCCTCGAGGGTGACAGAGATAATTATTCCAGAGTAGCATCATCATCTTCTAGCCCTAAAAGCCATGTCATCAAACAAGACAAAGATGTAGAATGTTCAGTATCAGATCTTTATAAGATGAAGCATTCAGTGCCTCAGAGTTTGCCTCAAAGTAACTATTTCACTACATTGTCTAATAGTGTAGTCAATGAACCACCAAGGTCATACCCATCCAAAGAGGTTTCAAATATTTACACTGAAAAACAGAGTAATACCCTTGGAGCAGCAGCAGCTAACCCTCAGACTCTGACTTCGTTTATATCATCTCTTTCAAAGCCTCCACCTTTGATTAAACACCAACCGGAAAGTGAAGGTTTAGTAGGCAAGGTACCAGAACATCTTCCCCATCAAATTGCTTCTCACTCAGTAACAACTTTCAGAAATGATTGTAGGAGTCCTACTCATTTGACAGTTTCTTCTACAAATACACTCCGGAGTATGCCTGCTTTACATAGAGCACCCGTATTTCACCCACCAATCCATCATAGCCTGGAGAGAAAGGAAAGCAGCTATAGTAGCCTTTCCCCTCCAACATTAACTCCAGTGATGCCCGTAAATGCTGGTGGGAAGGTTCAAGAATCACAAAAGCCTCCAACTCTGATTCCTGAGCCTAAAGACACTCAGGCAAATTTTAAGAGTTCTTCTGAACAGAGTTTGACAGAAATGTGGAAATCTAATAATAACCTCAGCAAAGAGAAAGCTGAATGGCATGTGGAGAAAAGCAGCGGAAAGTCACAGGCTGCTATGGCATCTGTCATTGTACGTCCACCTTCTAGTACAAAACTTGATAGCATGCCAGCAATGCAGTTAGCTTCCAAAGATCGAGTTAGTGAAAGATCTTCAATTGGGGCAAATCAAACAGATTGCCTTAAATCAGCAGAAGCTGGAGAGAGTGGAAGAATCATTCTGCCAAGTGTGAATTCAGACAGTGCTCACATAAAATCCGAAAAAAACTTTCAGGCTGTCTCACAGGGCACTGTTCCCAGTTCAGTCATGTCTGCTGTAAATACAATGTGTAATACCAAAACGGATATATTCACATCTGCTGCCACTACCACCAGTGTTTCCAGCTGGGGTGGTTCAGAAATAATTTACTCTTTATCAAATACCATTTTGGCCTCTAAATCTTTAGAATGTACCTCTTCGAAAAGTGTCAGTCATTCAGTGGCTCAAACACAAGAATGCAGGGTCAGCACGACAGCTCCAGTTACACCAGCCAGTAGTAAGACAGGAAGTGCTGTTCAATCCAGCTCTGGGTTCTCAGGCACAACTGATTTTATCCATTTAAAAAAGCACAAGGCAGCACTGGCTGCAGCTCAGTATAAAAGTAGTAATGTCAGTGAGACTGAGCCTAATGCTGTGAAAAATCAGACATCTTCAGCCTCCCCTCTCTTGGATAGCACTGTAGTCTGTAGTACAATTAACAAAGCAAACTCTGTAGGAAATGGGCAAGCATCCCAGACAAGTCAACCAAACTACCATACTAAACTGAAAAAGGCCTGGCTTACAAGACATTCAGAAGAAGATAAAAATACTAATAAAATGGAAAATTCAGGGAATTCTGTATCAGAAATTATTAAGCCATGTTCTGTCAATTTAATAGCCTCTACATCGAATGATCTACAAAATAGTGTAGATAGTAAGATCATAGTTGATAAATTTGTAAAAGATGATAAAGTCAATAGGAGAAAAGCCAAACGAACTTATGAATCTGGCTCTGAAAGTGGAGATTCAGACGAAAGTGAAAGCAAATCAGAGCAGAGGACTAAAAGGCAACCTAAGCCAACTTACAAAAAGAAGCAAAATGATCTTCAGAAGAGAAAAGGTGAAATAGAAGAAGATTTAAAACCCAATGGGGTTCTCAGCAGGAGTGCCAAAGAAAAAAGTAAATTGAAGTTGCAGAGCAACAATAATAGTGCTGGCATCCCTCGTTCAGTATTAAAAGACTGGCGTAAAGTCAAGAAGCTGAAGCAAACTGGGGAATCCTTTTTACAGGATGACTCCTGCTGTGAGATAGGGCCTAATTTGCAAAAGTGCCGAGAATGTAGACTTATTCGGAGTAAGAAGGGAGAAGAACCAACTCACTCACCAGTGTTTTGTAGATTTTACTACTTTAGACGATTGTCTTTTAGTAAAAATGGAGTGGTTAGAATAGATGGCTTCTCTTCTCCTGACCAATATGATGATGAAGCTATGAGTCTATGGACACATGAAAATTATGAAGATGATGAAGTAGACATAGAAACTTCAAAATACATCTTGGATATAATAGGTGATAAGTTCTGTCAGTTAGTAACATCTGAAAAAACAGCTTTGTCCTGGGTGAAAAAGGATGCCAAAATTGCCTGGAAAAGAGCAGTGAGAGGAGTCCGGGAGATGTGTGATGCGTGTGAAGCAACATTGTTTAACATTCATTGGGTTTGTCAAAAATGTGGATTTGTGGTCTGCTTAGATTGTTACAAGGCAAAGGAAAGGAAAAGTTCTAGAGTTTTGACAGATCTTCTAGATGCGATGCACACTCTTAGAGAAAAATATGGTATTAAATCCCATTGTCATTGTACTAACAAACAGAATATACAAGTTGGAAATTTTTCTGCTATGAATGGTGTGTCTCAAGTTTTACAGAATGTTCTTAATCACAGTAATAAAATTTCTCTGTGCATGCCTGAGTCTCAGCAGCAAAATACCCCTCAGAAGCCAGAGAGTAATGGCAACAGCAGCCCAGAGAGTGATGTATGCACAGACAGCAAGTTAACTCCTCCAGAATCCCAGTCACCACTGCACTGGTTAGCAGATCTTGCAGAGCAAAAGGCCAGAGAGGAAAAAAAAGAAAACAAAGAATTTGCCCTTGAAAAGCAAATTAAAGAAGAGAGAGAACAAGACAACCCTGATTCTCCCAATAGCAGAACATCACCTCCTGTGTCCCAGAATAATGAACAAGGCTCAACATTACGAGATTTGCTGACCACAACAGCTGGCAAGCTACGTGTGGGTTCTACAGATGCTGGCATTGCCTTTGCACCAGTTTATTCAATGGGAACCCCCAGTGGTAAAAGTGGAAGGACTATGCCAAACATTCTTGATGACATAATTGCTTCAGTTGTTGAAAACAAAATTCCACCAAATAAAGCCTCTAAGATAAATGTTAAACCAGAGCTCAAAGAAGAACCTAAAGAAAACAGAAAACCTGCCATGGATGAAAACAATAAATTGTACAGTGATATACCACATTCTTGGATCTGTGAGAAGCATATTCTGTGGCTTAAGGATTATAAAAATATTAATAATTGGAAGCTTTTCAAAGAGTGTTGGAAACATGGACAACCTGCAGTGGTTTCTGGTGTGCATAAGAAAATGAACATTAGCTTGTGGAAGGCGGACTCAGTTAGTCTTGATTTTGGAGACCACCAGGCTGATCTCCTGAACTGCAAAGACAGCATTATTTCAAATGCCAATGTTAAGGAATTCTGGGATGGTTTTGAAGAAGTTTCAAAACGGCAAAAAACGAAAGGTGGAGAAACAGTTGTTTTAAAACTGAAAGATTGCCCTTCAGGAGAAGACTTCAAGACTATGATGCCAGCAAGATATGAAGATCTTTTAAAAAGCCTGCCATTGCCAGAATATTGTAATCCAGAAGGAAAATTCAATTTGGCCTCTCATTTGCCAGGATTTTTTGTACGCCCTGATCTAGGACCCAGGTTGTGCAGTGCTTATGGTGTAGCTGCTGCTAAAGATCATGATATAGGAACAACAAATCTACATGTTGAAGTTTCTGATGTTGTAAATATTCTAGTCTATGTTGGCACAGCAAAAGGAAATGGCATTCTCTCAAAAGCAGGAATACTTAAGAAATTTGAGGAAGAAGATTTGGATGACATTTTAAGAAAACGATTGAAGGACTCAAGTGAAATACCTGGTGCCCTGTGGCATATTTATGCTGGGAAAGATGTTGACAAGATAAGGGAATTTCTTCAGAAGATTTCAAAAGAACAAGGCCTTGAAGTTCTACCAGAACACGATCCAATTCGTGACCAGAGTTGGTATGTGAACAAAAAGCTTCGCCAAAGACTGCTTGAGGAATATGGAGTCAAAGCCTGCACTCTTATTCAGTTCCTTGGTGATGCCATTGTCTTACCAGCAGGAGCACTTCATCAGGTACAGAATTTTCACAGCTGTATTCAGGTAACTGAAGACTTTGTGTCTCCAGAACACCTAGTACAGTCATTTCATTTAACACAAGAACTGAGACTTTTGAAGGAAGAAATCAATTATGATGATAAGCTACAGGTAAGAGATGAGTTTTCTAACTAG

Related Sequences

bmy_01405T0 Protein

Length: 2381 aa      View alignments
>bmy_01405T0
MQEQQRCFEREQNVRESSGGPTDCGKPCDCVIHISKEREPDDIDSLNPVLRDNPQLQEEVKVWVKEQKVQEIFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQMTFLDDVVHSLLKGENIGITSRRRSRASQNSNTVHGHYTRAQANSPRPAMNSQAAVPKQNSHQQQRNIRPNKRKGSDSSIPDEEKMKEEKYDYIARGENPKGKNKQVMNKRRKPEEDEKKLNMKRLRTDNVSDFSESSDSENSNKRIINNSSEQKPENELKNKNTSKINGEEGKSQNNEKAGEETLIDSQPPWDQIQEDKKHEETEKQKSVDSQLQEKMIIRSSEQATLSDHNSNDLLLQEHNMEKTHTVELLPKEKFVSRPPTPKCVIDITNDTIMEKVAQENSSTFGLQTLQKMDPDISDSKHSVTNTKYLETANQDSDQSWVXDVVKVDLTQSNVRNASSGNENLNMEKEKNQYVSYISSLSAVSVTEDKLHKRSPPPETIKSKLNTSVDAHKTKSNPSPEVVKPKINHSPDSVKSKPNFANSQTAGERRLASKIEHELSRCSFHPVPTRGSTLETTKSPLIIDKNEHFTVYRDPALVGSDTGANHISPFLSQHPFPLHSSSHRTCLNPGTHHPALSPAPHLLAGSSSQTPLPTINTHPLTSGPHHSVHHPHLLPAVLPGVPTASLLGGHPRLETAHASSLSHLALAHQQQQQLLQHQSPHLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPENAVNAESSLRRNSPSPWLHQPTPVTSADGIGLLSHIPVRPSSAEPHRPLKITAHSSPPLTKCLVDRHKEELERKAFIEPLRSVASTSAKNDLDLNRSQTGKDGHLHRHFVDPVLNQLQRPPQETGERLNKYKEEHRRILQESIDVAPFTTKIKGLEGDRDNYSRVASSSSSPKSHVIKQDKDVECSVSDLYKMKHSVPQSLPQSNYFTTLSNSVVNEPPRSYPSKEVSNIYTEKQSNTLGAAAANPQTLTSFISSLSKPPPLIKHQPESEGLVGKVPEHLPHQIASHSVTTFRNDCRSPTHLTVSSTNTLRSMPALHRAPVFHPPIHHSLERKESSYSSLSPPTLTPVMPVNAGGKVQESQKPPTLIPEPKDTQANFKSSSEQSLTEMWKSNNNLSKEKAEWHVEKSSGKSQAAMASVIVRPPSSTKLDSMPAMQLASKDRVSERSSIGANQTDCLKSAEAGESGRIILPSVNSDSAHIKSEKNFQAVSQGTVPSSVMSAVNTMCNTKTDIFTSAATTTSVSSWGGSEIIYSLSNTILASKSLECTSSKSVSHSVAQTQECRVSTTAPVTPASSKTGSAVQSSSGFSGTTDFIHLKKHKAALAAAQYKSSNVSETEPNAVKNQTSSASPLLDSTVVCSTINKANSVGNGQASQTSQPNYHTKLKKAWLTRHSEEDKNTNKMENSGNSVSEIIKPCSVNLIASTSNDLQNSVDSKIIVDKFVKDDKVNRRKAKRTYESGSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKRKGEIEEDLKPNGVLSRSAKEKSKLKLQSNNNSAGIPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCRECRLIRSKKGEEPTHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEAMSLWTHENYEDDEVDIETSKYILDIIGDKFCQLVTSEKTALSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERKSSRVLTDLLDAMHTLREKYGIKSHCHCTNKQNIQVGNFSAMNGVSQVLQNVLNHSNKISLCMPESQQQNTPQKPESNGNSSPESDVCTDSKLTPPESQSPLHWLADLAEQKAREEKKENKEFALEKQIKEEREQDNPDSPNSRTSPPVSQNNEQGSTLRDLLTTTAGKLRVGSTDAGIAFAPVYSMGTPSGKSGRTMPNILDDIIASVVENKIPPNKASKINVKPELKEEPKENRKPAMDENNKLYSDIPHSWICEKHILWLKDYKNINNWKLFKECWKHGQPAVVSGVHKKMNISLWKADSVSLDFGDHQADLLNCKDSIISNANVKEFWDGFEEVSKRQKTKGGETVVLKLKDCPSGEDFKTMMPARYEDLLKSLPLPEYCNPEGKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHVEVSDVVNILVYVGTAKGNGILSKAGILKKFEEEDLDDILRKRLKDSSEIPGALWHIYAGKDVDKIREFLQKISKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVKACTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVQSFHLTQELRLLKEEINYDDKLQVRDEFSN*