Sequence detailsbmy_01418 (Coding sequence)

Part of scaffold_34 (SequenceType object (1))

For more information consult the page for scaffold_34 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MED13LENSTTRG00000013985 (Bottlenosed dolphin)

Gene Details

Mediator complex subunit 13-like protein

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013270, Bottlenosed dolphin)

Protein Percentage 94.74%
cDNA percentage 94.27%
Ka/Ks Ratio 0.08742 (Ka = 0.0025, Ks = 0.0289)

MED13LENSBTAG00000001888 (Cow)

Gene Details

mediator of RNA polymerase II transcription subunit 13-like

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000002459, Cow)

Protein Percentage 97.8%
cDNA percentage 94.66%
Ka/Ks Ratio 0.05965 (Ka = 0.0108, Ks = 0.1816)

MED13L (Minke Whale)

Gene Details

mediator complex subunit 13-like

External Links

Gene match (Identifier: BACU013588, Minke Whale)

Protein Percentage 99.55%
cDNA percentage 99.22%
Ka/Ks Ratio 0.11441 (Ka = 0.0024, Ks = 0.0211)

Additional orthologs identified in other species via the OPTIC pipeline.

MED13L (Human)   Med13l (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 6018 bp    Location:1093764..1157874   Strand:+
Raw sequence 
>bmy_01418
AGTGAGCATTTGTCCTGTGCTTTCACATTCTTTCTTCATGGGGAAAGTAATGTATGCACAAGTGTGGAGATTGCCCAACACCAGCCAATTTATTTGATCAATGAGGAGCATATACACATGGCTCAGTCTTCACCTGCACCATTTCAAGTGCTGGTAAGTCCTTATGGCTTAAATGGCACGCTAACAGGCCAAGCATACAAGATGTCAGACCCAGCCACCCGTAAGTTGATTGAGGAATGGCAGTATTTCTACCCAATGGTGCTGAAAAAGAAAGAAGAATTGAAAGAAGAGGAGGAGTTGGGGTATGATGATGATTTCCCCGTGGCAGTAGAAGTAATTGTTGGTGGTGTTCGGATGGTTTATCCTTCAGCTTTTGTTTTGATCTCTCAGAATGACCTCCCAGTTCCTCAGAGTGTTGCTGGTACCGGAGGCCATATTACAGTTGGGCAGCAGGGACTTGGTAGTGTGAAGGACCCAAGTGAGAGTGGAGGGACACAGAGTGCTGTCAGTCACCTCGGTTCCCAAGACGGGGGGATGATAACTATGCACAGCCCAAAGAGATCGGGGAAGATTCCTCCAAAACTCCACAATCACATGGTCCATCGAGTCTGGAAGGAGTGCATCCTCAACAGAACGCAGTCCAAGAGGAGCCAGATGTCAACTCCAACTCTTGAAGAAGAGCCTGCTAACAATCCTGCTACTTGGGATTTTGTGGATCCAACCCAAAGAGTCAGCTGTTCTTGCTCTAGGCATAAACTTTTAAAACGTTGTGCAGTAGGACCCAGTCGACCTCCCACAATATCACAACCAGGGTTCAGTGCAGGACCATCATCATCTTCATCTTTACCACCTCCTGCTTCTTCTAAGCACAAAACAACAGAAAGACAGGAAAAGGGAGACAAGTTGCAAAAGAGACCCTTGATACCATTTCACCATCGGCCCTCTGTGGCCGAAGAGTTATGCATGGAGCAAGATCCACCAGGACAGAAGCTAGGCTTGGCAGGGATAGACTCCTCCTTGGAGGTGGTTAGCAGTAGGAAGTATGATAAGCAAATGGCCGTGCCTTCCAGAAATACAAGCAAGCAAATGAATCTGAATCCTATGGATTCACCTCATTCCCCTATTTCCCCTCTGCCGCCAACACTCAGCCCTCAGCCACGAGGTCAGGAAACGGAGAATTTGGACCCACCATCTGTCCCTGTGAATCCAGCTCTCTATGGAAATGGGCTAGAACTCCAGCAGTTGTCTACTCTGGATGACAGAACTGTCCTCGTAGGCCAAAGACTGCCTCTGATGGCAGAGGTCAGTGAGACCGCCTTATATTGTGGGATTAGGCCCTCGAACCCAGAGTCATCAGATAAGTGGTGGCATAGTTATCATCTCCCATCCGTTGATGATGCTGAGTTCCGGCCTCCAGAGCTCCAGGGTGAGAGATGTGATGCCAAAATGGAGGTAAACTCAGAGAGCACTGCATTGCAAAGACTCTTAGCACAACCTAACAAACGGTTTAAAATCTGGCAAGACAAGCAGCCCCAGATGCAGCCACTCCACTTCCTTGACCCACTGCCTCTATCACAACAACCTGGGGACAGTTTGGGAGAAGTCAATGACCCGTACACCTTTGAGGACGGCGACATAAAATACATCTTCACAGCGAACAAAAAATGCAAACAAGGGACAGAGAAAGATTCCCTGAAAAAGAATAAGTCAGAGGATGGATTTGGTACCAAGGATGTCACTACACCAGGTCATTCCACGCCGGTGCCTGAAGGGAAAAATGCCATGTCCCTTTTCAGTTCTACTAAAACAGATGTTCGGCAGGATAGTGCTGCTGGCAGGGCTGGCTCCAGTAGCCTTACACAAGTGACAGATTTGGCACCTTCCCTTCACGACTTAGACAACATCTTTGATAATTCTGATGACGACGAACTTGGGGCTGTGTCACCTGCACTACGGTCATCAAAAATGCCTACAGTTGGGACAGAAGACCGACCTCTTGGGAAGGATGGAAGAGCTGCTGTTCCTTACCCACCAACAGTTGCAGACCTGCAAAGGATGTTCCCCACCCCTCCTTCTTTGGAACAGCACCCTGCATTTTCTCCTGTGATGAATTATAAAGATGGAATCAGTTCAGAGACAGTGACAGCGTTAGGCATGATGGAGAGCCCTATGGTCAGTATGGTTTCAACACAGCTTACTGAATTCAAAATGGAAGTGGAAGACGGGTTAGGAAGTCCCAAGCCAGAGGAAATAAAGGACTTTTCATATGTGCACAAAGTTCCAACTTTTCAACCTTTTGTGGGATCCTCCATGTTTGCTCCACTGAAGATGTTGCCGAGCCAATGCCTGCTACCTCTGAAGATTCCTGATGCCTGTCTTAATGTGCCTAGTGTCGGGAGCCTAGCAGATCCAGATTATCTGAACACACCACAGATGAACACCCCGGTGACGCTGAACAGCGCTGCCCCAGCCAGCAACAGTGGAGCAGGAGTTTTGCCATCTCCAGCAACCCCTCGCTTCTCTGTCCCCACACCACGAACCCCCAGGACCCCAAGAACTCCCAGAGGAGGGGGCACTGCCAGTGGTCAAGGGTCTGTTAAATATGACAGCACCGATCAGGGGTCACCAGCCTCTACCCCCTCTACCACACGGCCTCTTAATTCTGTGGAGCCCGCCACCATGCAGCCAATTCCTGAAGCTCACAGTCTCTATGTCACTCTGATTCTTTCTGATTCCGTGATGAATATCTTTAAAGACAGAAACTTTGACAGCTGTTGCATCTGTGCCTGCAACATGAACATCAAAGGGGCGGATGTTGGGCTTTACATCCCCGATTCTTCCAATGAGGACCAGTACCGCTGTACCTGTGGGTTTAGTGCGATCATGAATCGCAAACTTGGTTACAATTCGGGACTCTTCCTGGAAGATGAGTTGGATATTTTTGGGAAGAATTCTGATATTGGTCAGGCTGCCGAAAGGCGCTTAATGATGTGTCAGACCACCTTCCTTCCGCAGATGGAAGGAGCCAGAAAATCCCAGGAGCCACCGATAAGCCTTCTCCTCCTCCTGCAGAATCAACATACACAACCTTTTGCTTCACTGAGTTTCCTGGACTACATTTCCTGTAACAATCGCCAAACTCTTCCCTGTGTGAGCTGGAGTTACGACCGGGTGCAAGCAGATAATAATGATTACTGGACGGAATGCTTTAATGCCTTGGAGCAGGGTCGACAGTATGTGGATAATCCCACAGGTGGCAAAGTGGATGAAGCTCTGGTGAGAAGTGCCACTGTGCACTCTTGGCCTCATAGCAATGTGCTGGACATCAGCATGCTCTCCTCCCAAGATGTGGTCCGTATGCTGTTGTCCCTGCAGCCCTTTCTCCAAGACGCCATCCAGAAGAAGCGCACGGGCAGGACCTGGGAGAATATCCAGCACGTGCAGGGACCACTCACCTGGCAGCAGTTCCACAAAATGGCAGGACGGGGAACCTACGGTTCTGAAGAATCTCCTGAGCCGTTGCCCATCCCCACTCTGCTGGTAGGCTATGACAAGGACTTCCTCACCATCTCGCCGTTCTCCTTGCCATTTTGGGAGAGGCTGTTGTTGGACCCATACGGGGGCCACCGTGATGTTGCCTATATTGTGGTGTGTCCAGAAAATGAGGCCTTGCTCGAAGGAGCCAAAACTTTTTTCAGGGACTTGAGCGCTGTATATGAGATGTGTAGGCTTGGGCAGCACAAGCCTATCTGCAAAGTGCTGCGCGACGGGATCATGCGCGTGGGGAAGACCGTGGCGCAGAAGCTGGCGGAAGAGCTTGTGAGCGAGTGGTTTAACCAGCCGTGGGGCAGCGAGGAGAGTGACAATCATTCCAGACTCAAACTTTATGCGCAAGTTTGCCGCCATCACCTAGCACCTTATCTAGCCACTCTGCAGCTCGACAGCAGCCTGTTGATACCACCTAAGTACCAGACCCCACCAGCAGCAGCACAGGGACAAGCTACACCTGGGAACGCGGGGCCTTTAGCTTCAAATCCAGGATCGGCAGCTCCCTCAGCTGGCAGTGCATTTAATCCCACCTCCAATGGCAGTTCTGTGAACCCGGCAGCAAGTAGCTCCGCATCTGGTTCCTCTGTGCCACCGGCCTCGACATCTGCCTCTGCTCCCATTATTAACCAGATAAGCACTACCTCTTCTTCAGGATTCAGTGGTAGTGTCGGAGGGCAGAACCCCAGCGCTGGGGCCAGCTCTGCAGAGAGAACGCAAGGGAGCATAGGCTGTGGTGGAGACACTGAGCCTGGGCAGAGCTCCTCTCAGCCCTCACAGGATGGACAGGAAAGTGTTACAGAAAGGGAGAGGATAGGAATTCCCACAGAGCCTGACTCTGCAGACAGCCAAGCCTACCCTCCAGCTGTTGTCATTTACATGGTGGACCCCTTCACTTATACCGCAGAGGAAGACTCCACTTCTGGAAATTTTTGGCTGTTGAGTTTGATGCGCTGCTACACAGAAATGCTGGATAATTTACCTGAGCATATGAGAAATTCTTTCATTCTCCAGATTGTGCCTTGCCAGTACATGCTGCAGACAATGAAGGATGAACAAGTTTTCTACATTCAATACTTGAAGTCCATGGCATTTTCAGTGTACTGCCAGTGCAGGCGACCTCTACCTACACAGATCCACATTAAATCCCTCACAGGATTTGGGCCTGCCGCCAGCATTGAGATGACTCTCAAGAACCCAGAGCGGCCCAGCCCAATCCAGCTTTACTCCCCTCCTTTTATACTGGCCCCAATCAAAGACAAGCAAACAGAGCTGGGAGAGACATTCGGTGAAGCGAGCCAGAAATACAATGTGCTCTTTGTGGGCTATTGTCTGTCTCACGACCAGCGCTGGCTTTTGGCTTCCTGCACTGACCTCCATGGAGAATTATTAGAAACATGTATTGTAAATATTGCTTTACCAAACAGATCACGGAGGAGTAAAGTATCTGCACGTAAAATTGGACTACAGAAGTTATGGGAATGGTGCATAGGTATTGTCCAAATGACATCTCTGCCCTGGAGAGTTGTAATTGGGCGACTTGGGCGTCTTGGCCATGGGGAACTTAAAGATTGGAGTATTCTCCTTGGAGAATGTTCACTACAGACAATCAGTAAACGGCTCAAGGACGTGTGCCGGATGTGTGGAATCTCTGCCGCAGACTCTCCTTCTATCCTTAGTGCCTGCCTGGTTGCCATGGAGCCCCAGGGGTCCTTTGTAGTGATGCCAGATGCTGTCACAATGGGCTCTGTTTTTGGCCGAAGTACTGCACTGAACATGCAGTCATCTCAGCTTAACACCCCTCAAGATGCTTCTTGTACACACATCTTGGTGTTCCCAACATCGTCAACCATCCAAGTGGCTCCAGCCAACTATCCCAATGAAGATGGGTTTAGCCCCAACAATGATGACATGTTTGTTGACCTTCCATTCCCAGATGATATGGACAATGATATTGGCATATTAATGACTGGGAACCTCCATTCCTCTCCCAACTCCTCCCCAGTTCCCTCCCCAGGCTCTCCTTCTGGAATTGGTGTGGGCTCTCACTTCCAGCATAGTCGGAGCCAGGGTGAGCGTCTTCTTTCCAGGGAGGCGCCTGAGGAGCTGAAACAGCAGCCGCTGGCCCTTGGGTATTTTGTATCGACCGCCAAGGCTGAGAATCTCCCCCAGTGGTTTTGGTCATCGTGTCCCCAGGCTCAGAACCAGTGTCCCCTCTTCCTCAAGGCTTCGCTGCATCACCACATTTCTGTAGCACAGACGGACGAACTTCTCCCTGCCAGGAATTCTCAGCGGGTTCCACATCCTCTTGACTCCAAAACCACGTCTGATGTTTTAAGGTTTGTTTTGGAGCAGTACAACGCTCTGTCCTGGCTCACGTGCAATCCGGCCACCCAGGACCGTACCTCCTGCCTTCCCGTCCACTTTGTGGTGCTCACTCAGTTGTACAACGCCATCATGAATATACTCTAA

Related Sequences

bmy_01418T0 SequenceType object (3)

Length: 2006 aa      View alignments
>bmy_01418T0
SEHLSCAFTFFLHGESNVCTSVEIAQHQPIYLINEEHIHMAQSSPAPFQVLVSPYGLNGTLTGQAYKMSDPATRKLIEEWQYFYPMVLKKKEELKEEEELGYDDDFPVAVEVIVGGVRMVYPSAFVLISQNDLPVPQSVAGTGGHITVGQQGLGSVKDPSESGGTQSAVSHLGSQDGGMITMHSPKRSGKIPPKLHNHMVHRVWKECILNRTQSKRSQMSTPTLEEEPANNPATWDFVDPTQRVSCSCSRHKLLKRCAVGPSRPPTISQPGFSAGPSSSSSLPPPASSKHKTTERQEKGDKLQKRPLIPFHHRPSVAEELCMEQDPPGQKLGLAGIDSSLEVVSSRKYDKQMAVPSRNTSKQMNLNPMDSPHSPISPLPPTLSPQPRGQETENLDPPSVPVNPALYGNGLELQQLSTLDDRTVLVGQRLPLMAEVSETALYCGIRPSNPESSDKWWHSYHLPSVDDAEFRPPELQGERCDAKMEVNSESTALQRLLAQPNKRFKIWQDKQPQMQPLHFLDPLPLSQQPGDSLGEVNDPYTFEDGDIKYIFTANKKCKQGTEKDSLKKNKSEDGFGTKDVTTPGHSTPVPEGKNAMSLFSSTKTDVRQDSAAGRAGSSSLTQVTDLAPSLHDLDNIFDNSDDDELGAVSPALRSSKMPTVGTEDRPLGKDGRAAVPYPPTVADLQRMFPTPPSLEQHPAFSPVMNYKDGISSETVTALGMMESPMVSMVSTQLTEFKMEVEDGLGSPKPEEIKDFSYVHKVPTFQPFVGSSMFAPLKMLPSQCLLPLKIPDACLNVPSVGSLADPDYLNTPQMNTPVTLNSAAPASNSGAGVLPSPATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQGSPASTPSTTRPLNSVEPATMQPIPEAHSLYVTLILSDSVMNIFKDRNFDSCCICACNMNIKGADVGLYIPDSSNEDQYRCTCGFSAIMNRKLGYNSGLFLEDELDIFGKNSDIGQAAERRLMMCQTTFLPQMEGARKSQEPPISLLLLLQNQHTQPFASLSFLDYISCNNRQTLPCVSWSYDRVQADNNDYWTECFNALEQGRQYVDNPTGGKVDEALVRSATVHSWPHSNVLDISMLSSQDVVRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGTYGSEESPEPLPIPTLLVGYDKDFLTISPFSLPFWERLLLDPYGGHRDVAYIVVCPENEALLEGAKTFFRDLSAVYEMCRLGQHKPICKVLRDGIMRVGKTVAQKLAEELVSEWFNQPWGSEESDNHSRLKLYAQVCRHHLAPYLATLQLDSSLLIPPKYQTPPAAAQGQATPGNAGPLASNPGSAAPSAGSAFNPTSNGSSVNPAASSSASGSSVPPASTSASAPIINQISTTSSSGFSGSVGGQNPSAGASSAERTQGSIGCGGDTEPGQSSSQPSQDGQESVTERERIGIPTEPDSADSQAYPPAVVIYMVDPFTYTAEEDSTSGNFWLLSLMRCYTEMLDNLPEHMRNSFILQIVPCQYMLQTMKDEQVFYIQYLKSMAFSVYCQCRRPLPTQIHIKSLTGFGPAASIEMTLKNPERPSPIQLYSPPFILAPIKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLASCTDLHGELLETCIVNIALPNRSRRSKVSARKIGLQKLWEWCIGIVQMTSLPWRVVIGRLGRLGHGELKDWSILLGECSLQTISKRLKDVCRMCGISAADSPSILSACLVAMEPQGSFVVMPDAVTMGSVFGRSTALNMQSSQLNTPQDASCTHILVFPTSSTIQVAPANYPNEDGFSPNNDDMFVDLPFPDDMDNDIGILMTGNLHSSPNSSPVPSPGSPSGIGVGSHFQHSRSQGERLLSREAPEELKQQPLALGYFVSTAKAENLPQWFWSSCPQAQNQCPLFLKASLHHHISVAQTDELLPARNSQRVPHPLDSKTTSDVLRFVLEQYNALSWLTCNPATQDRTSCLPVHFVVLTQLYNAIMNIL*