Part of scaffold_35 (Scaffold)

For more information consult the page for scaffold_35 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HPD ENSTTRG00000004196 (Bottlenosed dolphin)

Gene Details

4-hydroxyphenylpyruvate dioxygenase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003950, Bottlenosed dolphin)

Protein Percentage 96.94%
cDNA percentage 97.79%
Ka/Ks Ratio 0.27204 (Ka = 0.0138, Ks = 0.0507)

HPD ENSBTAG00000004175 (Cow)

Gene Details

4-hydroxyphenylpyruvate dioxygenase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005469, Cow)

Protein Percentage 93.13%
cDNA percentage 93.13%
Ka/Ks Ratio 0.13475 (Ka = 0.0316, Ks = 0.2343)

HPD  (Minke Whale)

Gene Details

4-hydroxyphenylpyruvate dioxygenase

External Links

Gene match (Identifier: BACU013632, Minke Whale)

Protein Percentage 98.08%
cDNA percentage 98.72%
Ka/Ks Ratio 0.29083 (Ka = 0.0075, Ks = 0.0257)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1182 bp    Location:865318..855288   Strand:-
>bmy_01442
ATGACGACTTACAGCAACAAAGGACAGAAGCCCGAGAGAGGCCAATTCCTCCACTTTCACTCCGTGACCTTCTGGGTTGGCAACGCGAAGCAGGCTGCGTCGTACTACTGCAGCAAGATGGGCTTTGAACCCCTAGCCTACAAGGGCCTGGAGACGGGTTCCCGGGAGATGGTCAGCCACGTGATCAAGCAAGGGAAGATTGTGTTCATCTTCTCCTCTGCCCTCAACCCCTGGAACAAAGAGATGGGCGATCACCTGGTGAAACACGGCGACGGAGTGAAGGACATTGCCTTCGAGGTGGAGGATTGTGACTACATCGTGCAGAAAGCCCGGGAACGAGGTGCCAAGATCGTGCGGGAACCCTGGGTAGAGCMAGATAAGTTTGGGAAGGTGAAGTTTGCTGTGCTGCAGACGTATGGGGATACTACACACACCCTGGTGGAGAAGATGAACTACACCGGCTGGTTCCTGCCTGGATTCGAGGCCCCAGCATTCGTCGACCCCCTACTTTCCAAGCTGCCCAACTGCAGTCTCGAGATAATTGATCACATTGTGGGAAATCAGCCTGATCAGGAGATGGTGTCTGCCTCAGAATGGTACCTGAAGAACCTGCAGTTCCACCGTTTCTGGTCCGTGGATGACACGCAGGTGCACACGGAGTACAGCTCTCTGCGGTCCATCGTGGTGGCCAATTACGAGGAGTCCATCAAAATGCCCATTAACGAGCCAGCGCCGGGCAGGAAGAAGTCCCAGATCCAGGAATATGTGGACTATAATGGGGGCGCTGGGGTCCAGCACGTCGCTCTCAAGACTGAAGACATCATCACAGCGATTCACCACTTGAGAGAGAGAGGCATGGAGTTTTTGGCTGTTCCATCCACATACTACAAACAACTGCGGGAGAAGCTCAAGTCGGCCAAGATCCGGGTGAAGGAGAATATTGATGTTCTGGAGGAGCTGAAAATCCTGGTGGACTACGACGAGAAAGGCTACCTCCTGCAGATTTTCACGAAGCCCATGCAGGACCGGCCCACGCTCTTCCTGGAAGTCATTCAGCGCTACAACCACCAGGGTTTTGGAGCCGGCAACTTCAACTCACTGTTCAAGGCCTTCGAGGAGGAGCAGGACCTGCGGGGCAACCTCACTGACATGGAGACCAACGGGCTTGCGTCCGGCATGTAG

Related Sequences

bmy_01442T0 Protein

Length: 394 aa      View alignments
>bmy_01442T0
MTTYSNKGQKPERGQFLHFHSVTFWVGNAKQAASYYCSKMGFEPLAYKGLETGSREMVSHVIKQGKIVFIFSSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCDYIVQKARERGAKIVREPWVEXDKFGKVKFAVLQTYGDTTHTLVEKMNYTGWFLPGFEAPAFVDPLLSKLPNCSLEIIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQIQEYVDYNGGAGVQHVALKTEDIITAIHHLRERGMEFLAVPSTYYKQLREKLKSAKIRVKENIDVLEELKILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQRYNHQGFGAGNFNSLFKAFEEEQDLRGNLTDMETNGLASGM*