Part of scaffold_35 (Scaffold)

For more information consult the page for scaffold_35 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000015798 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014969, Bottlenosed dolphin)

Protein Percentage 98.98%
cDNA percentage 97.76%
Ka/Ks Ratio 0.07481 (Ka = 0.0049, Ks = 0.0657)

BT.59536 ENSBTAG00000004203 (Cow)

Gene Details

vacuolar protein sorting-associated protein 33A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005508, Cow)

Protein Percentage 98.37%
cDNA percentage 94.01%
Ka/Ks Ratio 0.03794 (Ka = 0.0086, Ks = 0.2273)

VPS33A  (Minke Whale)

Gene Details

vacuolar protein sorting 33 homolog A (S. cerevisiae)

External Links

Gene match (Identifier: BACU013638, Minke Whale)

Protein Percentage 95.31%
cDNA percentage 94.97%
Ka/Ks Ratio 0.33462 (Ka = 0.0356, Ks = 0.1063)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1521 bp    Location:1189062..1163756   Strand:-
>bmy_01452
ATGGCGACGCACCTGTCCTACGGGCGAGTGAACCTGAACGTGCTGCGCGAGGCGGTGCGTCGCGAGCTGCGCGAGTTCCTGGACAAGTGCGCGGGAAGCAAGGAACATGAAGTGGAAAAAATGTTCACGCTTAARGGAAGTCGTTTGCCAGCAGCTGATGTCAAGAATATTATTTTTGTTGTCAGACCCAGGCTAGAATTGATGGATATAATCTCTGAAAATGTGCTCAGGGAGGAGTACAGCCTAGATCTCATTCCATTTGATGGGGATCTCTTATCCATGGAATCAGAGGGTGCATTCAAAGAGTGCTACCTGGAGAGCGACCAGACCAGCCTGTACCACGCAGCCAAGGGGCTGATGACCCTGCAAGCTCTGTACGGGACGATCCCCCAGATCTTTGGGAAAGGAGAGTGCGCCCGGGTGAGAAACGGCAGGAGGGCCCCAGCTGATCCCATGTTTTATTTCCAGCAAGTGGCCAATATGATGATCAGGATGAAGAGGGAGTTTACAGGGAGCCAGAATTCAATATTCCCTGTTTTTGATAATCTCTTGTTGCTCGATCGCAATGTGGATCTGTTAACGCCTCTTGCCACTCAGCTTACGTATGAAGGACTCATTGATGAAATTTATGGCATTCAGAACAGTTACGTGAAATTACCTCCGGAGAAATTTGCACCTAAGAAACAGGGCGATGGTGGTAAGGACCTTCCCACGGAAGCAAAGAAGCTTCAGCTGAATTCTGCAGAGGAGCTGTATGCTGAGATCCGAGATAAAAACTTCAATGCAGTGGGCTCCGTGCTTAGCAAGAAAGCAAAGGTGATCTCTGCAGCATTCGAGGAGAGGCACAATGCCAAGACCGTTGGGGAGATCAAGCAGTTCGTTTCGCAGCTGCCCCACATGCAGGCAGCAAGGGGCTCCCTCGCAAACCACACCTCGATTGCAGAGCTAATCAAAGATGTAACTACTTCTGAAGACTTCTTTGATAAATTAACAGTGGAGCAGGAGTTTATGTCTGGAATAGACACTGATAAGACATACGGCTATGAGCACATATTGACCTTGCACAACCTAGAGAAGACTGGCCTGCTGAAACCACAGACGGGGGGCAGAAACACTTACCCAACCATCCGGAAAACGTTACGCCTCTGGATGGATGATGTAAACGAGCAAAATCCCACGGACATATCGTACGTGTACAGTGGTTATGCCCCTCTCAGCGTGCGCCTGGCCCAGCTGCTTTCCCGGCCCGGCTGGCGGAGTATTGAGGAAGTTCTGCGCATCCTCCCAGGGCCCCACTTTGAGGAGCGGCAGCCATTGCCCACAGGGCTGCAAAAGAAACGTCAACCGGGAGAAAACCGAGTCACTCTGATATTTTTCCTCGGGGGTGTAACCTTTGCTGAAATTGCTGCCCTACGATTTCTTTCCCAGCTGGAAGATGGAGGTACAGAATATGTCATCGCCACCACTAAACTAATAAACGGGGCCAGCTGGATAGAGTCGCTAATGGAAAAACCTTTCTAG

Related Sequences

bmy_01452T0 Protein

Length: 507 aa      View alignments
>bmy_01452T0
MATHLSYGRVNLNVLREAVRRELREFLDKCAGSKEHEVEKMFTLKGSRLPAADVKNIIFVVRPRLELMDIISENVLREEYSLDLIPFDGDLLSMESEGAFKECYLESDQTSLYHAAKGLMTLQALYGTIPQIFGKGECARVRNGRRAPADPMFYFQQVANMMIRMKREFTGSQNSIFPVFDNLLLLDRNVDLLTPLATQLTYEGLIDEIYGIQNSYVKLPPEKFAPKKQGDGGKDLPTEAKKLQLNSAEELYAEIRDKNFNAVGSVLSKKAKVISAAFEERHNAKTVGEIKQFVSQLPHMQAARGSLANHTSIAELIKDVTTSEDFFDKLTVEQEFMSGIDTDKTYGYEHILTLHNLEKTGLLKPQTGGRNTYPTIRKTLRLWMDDVNEQNPTDISYVYSGYAPLSVRLAQLLSRPGWRSIEEVLRILPGPHFEERQPLPTGLQKKRQPGENRVTLIFFLGGVTFAEIAALRFLSQLEDGGTEYVIATTKLINGASWIESLMEKPF*