Part of scaffold_35 (Scaffold)

For more information consult the page for scaffold_35 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCDC62 ENSTTRG00000015859 (Bottlenosed dolphin)

Gene Details

coiled-coil domain containing 62

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015027, Bottlenosed dolphin)

Protein Percentage 92.6%
cDNA percentage 95.23%
Ka/Ks Ratio 0.66602 (Ka = 0.0427, Ks = 0.0641)

CCDC62 ENSBTAG00000003527 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004583, Cow)

Protein Percentage 90.97%
cDNA percentage 92.2%
Ka/Ks Ratio 0.30458 (Ka = 0.0507, Ks = 0.1663)

CCDC62  (Minke Whale)

Gene Details

coiled-coil domain containing 62

External Links

Gene match (Identifier: BACU013644, Minke Whale)

Protein Percentage 95.3%
cDNA percentage 97.02%
Ka/Ks Ratio 0.80408 (Ka = 0.0269, Ks = 0.0334)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1917 bp    Location:1546574..1572511   Strand:+
>bmy_01461
ATGAACCCTTCGGCCTCCTTCCTGGCCGGGCGCCAGAACATTGGGTCAGAAGTTGAGATTTCCACTATCGAGAAACAACGGAGAGAGCTGCAGCTGCTCATTGGAGAATTAAAAGATCGAGATAGAGAGCTCAATGATATGGTTGCAGTACATCAAAGACAACTTCTTTCATGGGAAGAGGATCGGCAGAAAGTGTTGACTTTGGAAGAACGTTGCAGCAAATTAGAAGGTGAACTACATAAAAGAACCGAAATAATCAGGTCACTCACAAAGAAGGTAAAAACCCTTGAATCGAATCAAATTGAATGCCAAAGTACTCTTCAAAAGACTCAACTACAGCTTCAAGAAATGGCCCAAAAGGCAACCCATTCCACTCTCCTCTCTGAAGACCTTGAGGCTAGAAACGAAAATCTCAGCAACACATTAGTGGAACTTTCTGCTCAAGTGGGACAATTGCAAGCTCGAGAACAGGCTCTCACCACCATGATAAAGCTGAAGGACAAAGATATTATCGAGGCAGTCAGTCACATTGCTGACTGTTCGGGTAAATTTAAATTGTTAGAGCATGCCTTACGCGATGCTAAGATGGTGGAGGCCTGTATTGTGAAAGAAAAGCAAGATTATAAGCAGAAATTGAAGGCACTTAAGATTGAAGTCAATAAGCTAAAAGAGGATCTAAATGAAAAGACAACAGAAAATAATGAACAACGAGAAGAGATCATTCGCCTCAAGCAAGAGAAAAGTTGCCTGCATGATGAATTGGTTTTTACTGTAGAGAGAGAAAAAAGGAAAGACGAGTTACTGGATATCGCAAAGTCAAAGCAAGAACGCATGAGCGCAGAGCTGCATAATCTGAGACAGAGGGAGGAAAATCAGAAGTCACTGGTTAAGGACCAAAAATTTGAGACCACGTTGGTTCAGCAAAATAAGTCAGACAAGAGCCCTTATGATGTATGCAAAGAGAAGAAACTACAGGTTAATACTTCATTTGGGGGAAAAAGTGTAATTGCTGTCTCATCTCTATTTGCAAAAGACTTAGTGGAGAAACAAAAGTCTTGGTCTCTGGGAGGAAAAATCCAGACTGAACCCGAAAACAAAAGTACATTTTGCAAGATCCACGCAAAATCACCAAAAGGTAATGGAGTTGGGATTCAGAATGAAGAGAAACAACTCTCGGAAACATCAACATCTGTATCCGGTGAAAAGTGGCATGACRTCAGCCTTTACCTGGGCCTGGCCAACTGTTCTGGTTCAAAACAACCAGAAAAGCTGGATGTCGAATGTCAAGATCACCTGGAAAGGTCTGGAGTCTCATGTTGCCATAAAAGCGAAGCCTGTCTGGATGAAAGCGACGCCCATCTGGATGAAAGCAACATGTGGGAATCCAAGTGCTGCCACCCGAGTAACTTCACAATCGAAGCTCCAGGCCACATGTCTGACGTGGAATGGATGAGCATCTTCAAGCCTTCCAAAGTGCAGAGAATCGTGCGCCACMAATCAGTGTGCACTTGTTCGGAAARTGCCAGTGGAACCAAATACAACTCCTCTACAAGTGAGCTGATTGCCATCCAGCAGTCCCACTGTTTGGGTTCTTCAAAATCTGCCTTAAGAGAGGATGAGAAGTTCATAGAGACGGAGTCCTCTTCTGATAAAAAGAACTCATCTGAGATTTTGTTAGTCAACAAAGATGCAGCATTGCCCAGTGAAAAGGATGACTTTTCTCCCACAAGCAAGCTTCAGCGTTTGCTGGCAGAATCCCGTCAGATGGTTACAGATCTGGAGYTGAGCACGCTGCTCCCCATCAGCTCTGAGAATCTCAGCAGCAGCGCCAGAAATGTACGTGGTTCCTTTTCTTTCGACCCCATTTGTAGTATCCAAACACTCCAGTCGCTGTGTGCAAACGTCCCTTTCTGTTAG

Related Sequences

bmy_01461T0 Protein

Length: 639 aa      View alignments
>bmy_01461T0
MNPSASFLAGRQNIGSEVEISTIEKQRRELQLLIGELKDRDRELNDMVAVHQRQLLSWEEDRQKVLTLEERCSKLEGELHKRTEIIRSLTKKVKTLESNQIECQSTLQKTQLQLQEMAQKATHSTLLSEDLEARNENLSNTLVELSAQVGQLQAREQALTTMIKLKDKDIIEAVSHIADCSGKFKLLEHALRDAKMVEACIVKEKQDYKQKLKALKIEVNKLKEDLNEKTTENNEQREEIIRLKQEKSCLHDELVFTVEREKRKDELLDIAKSKQERMSAELHNLRQREENQKSLVKDQKFETTLVQQNKSDKSPYDVCKEKKLQVNTSFGGKSVIAVSSLFAKDLVEKQKSWSLGGKIQTEPENKSTFCKIHAKSPKGNGVGIQNEEKQLSETSTSVSGEKWHDXSLYLGLANCSGSKQPEKLDVECQDHLERSGVSCCHKSEACLDESDAHLDESNMWESKCCHPSNFTIEAPGHMSDVEWMSIFKPSKVQRIVRHXSVCTCSEXASGTKYNSSTSELIAIQQSHCLGSSKSALREDEKFIETESSSDKKNSSEILLVNKDAALPSEKDDFSPTSKLQRLLAESRQMVTDLELSTLLPISSENLSSSARNVRGSFSFDPICSIQTLQSLCANVPFC*