Part of scaffold_35 (Scaffold)

For more information consult the page for scaffold_35 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VPS37C ENSTTRG00000000041 (Bottlenosed dolphin)

Gene Details

vacuolar protein sorting 37 homolog C (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000036, Bottlenosed dolphin)

Protein Percentage 38.87%
cDNA percentage 51.24%
Ka/Ks Ratio 0.03375 (Ka = 0.5846, Ks = 17.3232)

VPS37C ENSBTAG00000008064 (Cow)

Gene Details

vacuolar protein sorting-associated protein 37C

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010607, Cow)

Protein Percentage 40.64%
cDNA percentage 52.3%
Ka/Ks Ratio 0.03849 (Ka = 0.6082, Ks = 15.8023)

VPS37C  (Minke Whale)

Gene Details

vacuolar protein sorting 37 homolog C (S. cerevisiae)

External Links

Gene match (Identifier: BACU005406, Minke Whale)

Protein Percentage 39.22%
cDNA percentage 52.06%
Ka/Ks Ratio 0.03569 (Ka = 0.5818, Ks = 16.2995)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1104 bp    Location:1645986..1619394   Strand:-
>bmy_01463
ATGGCGGGTGCCGGGAGCGAAGCCCGGTTCGCCGGGTTGTCGCTGGTGCAGCTCAACGAGCTGCTGGAGGACGAGGGGCAGCTGACAGAGATGGTGCAGAAGATGGAGGAGCGCAGCTCCTGGGGTGAAAGCTTCAGCAGGTCCTGGGACAAAGCCCGTCCTGCAGGCCTGAAGGAGAGGAAGTGCTCTCGCTCTTTAAGAACGGGAACAGCGTCCAAACTAGAAATCGGGGCTGGCGTCGGGACGGGGGCAGCTGCCCAGCCAAACGGAAGCTGCTGCGGTGGCCCCGGGGGTGGGGCCCGGGGCTCGCACGCTGGTTCTCATCACCCTGTATGGTCTTTGCAGACGCGGAACATTCAGCTTAACAAAGAAATGACGCTGGCCAGCAACCGGAGCCTGGCGGAAGGAAGCCTTCTCTACCGGCCCCAGCTGGACTCTCTGAAAGCACGTTTGACCCAAAAATACCAGGACCTCCAGGGGCTCTTTGAAGCCTACCACATAAAAAAGACCAAATTAGATCAACAGTCCAGCAGCGCTTCCTTGGAGACCCTGTTAGCGCTTCTGCAGGCGGAAGGGGCCAAGATCGAGGAGGACACGGAGAACATGGCAGAGAAGTTTCTCGATGGAGAGCTTCCCCTGGACTCCTTCATCGATGTCTATCAGAGCAAGCGGAAACTGGCCCACATGCGAAGGGTTAAAATCGAGAAGCTCCAGGAGATGGTGCTGAAGGGGCAGAGACTTCCCCAGGCCCCGCCGCCGGCCCTGCTGCCCCCCAGGGTGCCCGAGCCGGTGCCCGCTGCCCCCCTGCCCTACCCCTCCCCAGAGGCCAGCGGGCCCCCCTCCGCGGTGCCTCGGCGCATCCCTCCCCCACCGCCCCCGGTGCCTGCGGGACGCTTAGCCGCGCCATTCGCCGCCGCCCTGGGCTCAGGACAGGGCCCCCTGCACCCAGTGGCGCAGTGCCCACCGCTGCCCCCGCGCGGGGGCCTCCCCGCAGAGCAGGGCTTCTCCCTGCAGCAGTTTGTGTTGCCACCGTACCCGCCGGCGCTGCCCCAGAGACCCCCGCCCCGGCTGCCTCCGCACCAGCCAGGCTTCATCCTCCAGTGA

Related Sequences

bmy_01463T0 Protein

Length: 368 aa      View alignments
>bmy_01463T0
MAGAGSEARFAGLSLVQLNELLEDEGQLTEMVQKMEERSSWGESFSRSWDKARPAGLKERKCSRSLRTGTASKLEIGAGVGTGAAAQPNGSCCGGPGGGARGSHAGSHHPVWSLQTRNIQLNKEMTLASNRSLAEGSLLYRPQLDSLKARLTQKYQDLQGLFEAYHIKKTKLDQQSSSASLETLLALLQAEGAKIEEDTENMAEKFLDGELPLDSFIDVYQSKRKLAHMRRVKIEKLQEMVLKGQRLPQAPPPALLPPRVPEPVPAAPLPYPSPEASGPPSAVPRRIPPPPPPVPAGRLAAPFAAALGSGQGPLHPVAQCPPLPPRGGLPAEQGFSLQQFVLPPYPPALPQRPPPRLPPHQPGFILQ*