Part of scaffold_35 (Scaffold)

For more information consult the page for scaffold_35 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SBNO1 ENSTTRG00000015882 (Bottlenosed dolphin)

Gene Details

strawberry notch homolog 1 (Drosophila)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015050, Bottlenosed dolphin)

Protein Percentage 95.81%
cDNA percentage 95.42%
Ka/Ks Ratio 0.08071 (Ka = 0.0021, Ks = 0.0258)

SBNO1 ENSBTAG00000020505 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027325, Cow)

Protein Percentage 98.97%
cDNA percentage 96.48%
Ka/Ks Ratio 0.03306 (Ka = 0.0047, Ks = 0.1419)

SBNO1  (Minke Whale)

Gene Details

strawberry notch homolog 1 (Drosophila)

External Links

Gene match (Identifier: BACU013653, Minke Whale)

Protein Percentage 99.37%
cDNA percentage 99.32%
Ka/Ks Ratio 0.17872 (Ka = 0.0035, Ks = 0.0196)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 4098 bp    Location:2011268..1958601   Strand:-
>bmy_01473
ATGGGGACGATGGTGGAGCCAGGGCAAGATTTACTGCTTGCTGCTTTGAGCGAGAGTGGAATTAGTCCGAATGACCTCTTTGATATTGATGCTGGAGATGCGGGGCTTGCAACTCCAACACCTACCCCTCCCGTACAGCAGTCAGTGCCACTTAGTGCATTAGAACTAGGTTTGGAGACTGAAGCAGCAGTTCCTGTTAAACAAGAACCAGAGACGCTACCTACTCCAGCACTATTAAATGTTAGGCAGCAGCCTCCATCTACTACAACATTTGTGCTGAATCAAATAAATCAGCTTCCGACTTTGGGATCTACAATTGTAATGACTAAAACACCACCTGTAACCACGAATAGGCAAACCATCACTTTAACAAAGTTCATTCAGACTACTGCAAACACACGTCCTTCAGTCTCAGCACCAGCAGCACGAAATGCCATGACCTCTGCACCTTCAAAAGACCAGGTTCAACTGAAGGACCTACTAAAAAATAATAGTCTGAACGAACTCATGAAACTGAAGCCACCGGCTAATATTGCTCAGCCAGTTGCAACAGCAGCTACTGATGTAAGCAATGGCACAGTAAAGAAAGAGTCTTCTAATAAAGAAGTAGCAAGAATATGGATAAATGACATGAAAATGAGGAGTTTTTCCCCGACCATGAAGGTCCCTGTTGTGAAAGAGGAAGATGAACCAGAGGAAGAAGATGAAGAAGAAATGGGTCATGCGGAAACCTATGCAGAGTATATGCCAATAAAATTAAAAATTGGCCTGCGTCACCCAGATGCTGTAGTTGAAACTAGTTCTTTATCCAGTGTTACTCCTCCTGATGTTTGGTACAAAACATCTATTTCTGAAGAAACCATTGATAATGGCTGGTTATCAGCATTACAGCTTGAGGCAATTACATATGCAGCCCAGCAACATGAAACATTCCTACCAAATGGAGATCGTGCTGGATTCTTAATAGGTGATGGTGCTGGTGTAGGAAAAGGAAGGACAATAGCAGGAATCATCTATGAAAATTATTTGTTGAGTAGAAAAAGGGCTTTGTGGTTCAGTGTTTCAAATGATTTAAAATATGATGCCGAAAGAGATTTGAGGGATATTGGAGCAAAAAACATTTTGTTTAAATATGGAAAAATTTCTTCCAAACATAATGGGAGTGTGAAGAAGGGTGTGATTTTTGCTACCTATTCTTCCCTCATTGGTGAAAGTCAGTCTGGTGGTAAATACAAAACGAGGTTAAAACAACTCCTACATTGGTGCGGTGATGACTTCGATGGAGTGATAGTGTTTGATGAATGTCATAAAGCAAAAAACTTATGTCCTGTTGGTTCTTCAAAGCCAACCAAGACAGGCTTAGCAGTTTTAGAACTTCAGAACAAATTGCCAAAAGCCAGAGTTGTTTATGCTAGTGCCACTGGTGCTTCTGAACCACGAAACATGGCCTATATGAACCGTCTTGGAATATGGGGTGAGGGAACTCCATTTAGAGAATTCAGTGATTTTATTCAGGCAGTAGAACGGAGAGGTGTTGGTGCCATGGAAATAGTTGCTATGGATATGAAGCTTAGAGGAATGTACATTGCTCGACAGCTGAGCTTTACTGGAGTGACCTTCAAAATTGAGGAAGTTCTTCTTTCTCAGAGCTATGTTAAAATGTATAACAAAGCAGTCAAACTGTGGGTCATTGCCAGAGAGCGATTTCAGCAAGCTGCAGATCTGATTGATGCTGAGCAACGGATGAAAAAATCCATGTGGGGTCAGTTCTGGTCTGCTCACCAGAGATTTTTCAAATACTTGTGCATAGCATCCAAAGTTAAGAGGGTTGTTCAACTAGCTCGAGAAGAAATCAAGAATGGAAAATGTGTTGTAATTGGTCTGCAGTCTACGGGAGAAGCTAGAACATTAGAAGCCTTGGAAGAGGGTGGAGGAGAATTGAACGATTTCGTTTCAACTGCCAAAGGAGTGTTGCAGTCACTCATTGAAAAACACTTCCCTGCTCCAGACAGGAAAAAACTTTATAGTTTGCTAGGAATCGATTTGACAGCTCCAAGTAACAACAGCTCACCAAGAGATAGTCCTTGTAAGGAAAATAAAATAAAGAAGCGGAAAGGTGAAGAAATAACTCGAGAATCCAAAAAAGCACGAAAAATAGGTGGCCTTACTGGTAGCAGTTCTGATGATAGTGGAAGTGAATCTGATGCCTCCGATAATGAAGAAAGCGACTACGAGAGCTCTAAAAACATGAGTTCTGGAGATGACGATGATTTCAACCCATTTAGAGATGAGTCTAGTGAGGATGATGAAGATGATCCCTGGTTAATCAGAAAGGACCACAAGAAAAACAAAGATAAAAAAAAAAAGAGAAGTATAGATCCAGATTCTATTCAAAGTGCCTTATTAGCATCAGGTCTTGGATCAAAACGACCTAGTTTTTCTTCTACGCCAGTAATTTCACCTGCTCCTAACAGTGCACCAGCTAACAGTAACACCAACAGCAACAATAGCCTTATAACAAGTCAGGATGCCGTGGAAAGGGCCCAGCAGATGAAGAAAGACCTACTTGATAAACTAGAAAAATTAGCTGAAGACCTCCCTCCTAATACCCTGGATGAACTTATTGATGAACTTGGTGGCCCTGAGAACGTTGCTGAGATGACTGGCCGCAAGGGGAGGGTTGTAAGCAATGATGATGGAAGTATATCTTATGAGTCAAGATCTGAACTTGACGTCCCTGTGGAAATACTAAATATCACGGAAAAACAAAGATTTATGGATGGAGATAAGAATATTGCTATCATCTCAGAAGCTGCCAGCTCAGGTATTTCATTACAAGCAGATAGGAGAGCTAAAAATCAAAGGCGAAGAGTTCATATGACTCTGGAATTACCATGGAGTGCTGATAGAGCAATTCAGCAGTTTGGACGAACTCATAGATCAAACCAAGTTACTGCTCCGGAATACGTCTTTCTGATTTCTGAATTGGCAGGAGAACAAAGATTTGCATCTATTGTTGCTAAAAGACTTGAGAGTTTAGGTGCGCTTACACATGGAGACAGAAGAGCAACAGAATCCAGAGATCTGAGTAGGTTCAACTTTGATAATAAGTATGGAAGAAATGCTTTAGAAATTGTCATGAAATCCATTGTAAACCTAGATTCTCCTATGGTATCACCACCTCCAGACTATCCTGGAGAATTCTTTAAAGATTATAACAACATAGGAAAATTCTTGAATAGAATTTTGGGCATGGAGGTGCATCAACAGAATGCGTTATTTCAGTATTTTGCAGACACACTTACTGCAGTTGTCCAAAATGCCAAAAAAAATGGAAGATATGACATGGGAATCTTAGATCTTGGTTCTGGAGATGAAAAAGTGAGGAAAAGTGATGTTAAGAAGTTTCTGACTCCAGGATATTCAACCTCTGGCCATGTAGAATTATACACGATAAGTGTAGAGAGGGGAATGTCCTGGGAGGAAGCTACCAAGATTTGGGCTGAGTTGACAGGACCAGATGATGGCTTTTATTTGTCATTGCAAATAAGAAACAACAAGAAAACTGCCATCTTAGTTAAAGAAGTGAATCCTAAAAAGAAGCTTTTCTTAGTTTATAGACCAAATACTGGGAAACAGCTCAAATTAGAAATTTATGCTGATCTAAAAAAGAAATATAAGAAGGTAGTCTCAGACGATGCCCTGGTCCACTGGTTAGATCAGTATAATTCATCTGCAGATACTTGTACTCATGCTTATTGGCGTGGCAATTGCAAAAAAACAAGTTTGGGATTAGTTTGTGAAATAGGTCTTCGTTGCCGCACGTACTATGTATTATGTGGCTCAGTACTGAGTGTCTGGACAAAAGTCGAGGGTGTTCTCGCATCTGTCAGTGGCACAAACGTGAAAATGCAGATAGTTCGGCTAAGAACAGAGGATGGACAGCGGATTGTAGGTTTGATCATTCCTGCAAATTGTGTGTCTCCTCTTATAAATCTCCTGTCAACTTCAGACCAGTCTCAACAGCTTGCAGTCCAGCAGAAACAGCTCTGGCAGCAGCGTCACCCCCAGAGCATCGCCAACTTGAGCAACACATAA

Related Sequences

bmy_01473T0 Protein

Length: 1366 aa      View alignments
>bmy_01473T0
MGTMVEPGQDLLLAALSESGISPNDLFDIDAGDAGLATPTPTPPVQQSVPLSALELGLETEAAVPVKQEPETLPTPALLNVRQQPPSTTTFVLNQINQLPTLGSTIVMTKTPPVTTNRQTITLTKFIQTTANTRPSVSAPAARNAMTSAPSKDQVQLKDLLKNNSLNELMKLKPPANIAQPVATAATDVSNGTVKKESSNKEVARIWINDMKMRSFSPTMKVPVVKEEDEPEEEDEEEMGHAETYAEYMPIKLKIGLRHPDAVVETSSLSSVTPPDVWYKTSISEETIDNGWLSALQLEAITYAAQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAERDLRDIGAKNILFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQLLHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTGVTFKIEEVLLSQSYVKMYNKAVKLWVIARERFQQAADLIDAEQRMKKSMWGQFWSAHQRFFKYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVLQSLIEKHFPAPDRKKLYSLLGIDLTAPSNNSSPRDSPCKENKIKKRKGEEITRESKKARKIGGLTGSSSDDSGSESDASDNEESDYESSKNMSSGDDDDFNPFRDESSEDDEDDPWLIRKDHKKNKDKKKKRSIDPDSIQSALLASGLGSKRPSFSSTPVISPAPNSAPANSNTNSNNSLITSQDAVERAQQMKKDLLDKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSNDDGSISYESRSELDVPVEILNITEKQRFMDGDKNIAIISEAASSGISLQADRRAKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTHGDRRATESRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPPDYPGEFFKDYNNIGKFLNRILGMEVHQQNALFQYFADTLTAVVQNAKKNGRYDMGILDLGSGDEKVRKSDVKKFLTPGYSTSGHVELYTISVERGMSWEEATKIWAELTGPDDGFYLSLQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLKLEIYADLKKKYKKVVSDDALVHWLDQYNSSADTCTHAYWRGNCKKTSLGLVCEIGLRCRTYYVLCGSVLSVWTKVEGVLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLINLLSTSDQSQQLAVQQKQLWQQRHPQSIANLSNT*