Part of scaffold_35 (Scaffold)

For more information consult the page for scaffold_35 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RILPL1 ENSTTRG00000014593 (Bottlenosed dolphin)

Gene Details

Rab interacting lysosomal protein-like 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013837, Bottlenosed dolphin)

Protein Percentage 84.62%
cDNA percentage 85.44%
Ka/Ks Ratio 0.19999 (Ka = 0.0886, Ks = 0.443)

BT.62192 ENSBTAG00000008061 (Cow)

Gene Details

RILP-like protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029666, Cow)

Protein Percentage 92.2%
cDNA percentage 90.25%
Ka/Ks Ratio 0.10969 (Ka = 0.0509, Ks = 0.4638)

RILPL1  (Minke Whale)

Gene Details

Rab interacting lysosomal protein-like 1

External Links

Gene match (Identifier: BACU013657, Minke Whale)

Protein Percentage 93.59%
cDNA percentage 94.24%
Ka/Ks Ratio 0.24818 (Ka = 0.043, Ks = 0.1733)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1080 bp    Location:2128996..2082810   Strand:-
>bmy_01477
ATGGAGGAAGACCGGGGGTCGGCGCTGGCGGCCGAGTCGGCGCTGGAGAAGAACGTGGCGGAGCTGACCGTCATGGACGTGTACGACATCGCGTCGCTCGTGGGCCACGAGTTCGAGCGGGTCATCGACCAGCACGGCTGCGAGGCCATCGCGCGCCTCATGCCCAAGGTCGTGCGTGTCCTGGAGATCCTGGAGGTGCTGGTCAGCCGCCACCACGTCGCGCCCGAGCTGGACGAGCTGCGCCTCGAGCTGGACCGACTGCGCCTGGAGAGGATGGACCGCATCGAGAAGGAGCGCAAGCACCAGAAGGAGCTGGAGCTGGTGGAGGACGTGTGGCGAGGGGAAGCGCAAGACCTCCTTTCCCAGATCGCGCAGCTGCAGGAGGAGAACAAGCAGCTCATGACCAACCTCTCCCACAAGGACGTCAGCTTCTCCGAGGAGGAGTTCCAGAAGCATGAAGGCATGTCGGAGCGGGAGCGACAGGTGATGAAGAAGCTGAAGGAGGTGGTGGACAAACAGCGCGACGAGATCCGCGCCAAGGATCGGGAGCTCGGGCTGAAGAACGAGGACGTCGAGGCTATCAACCACGACCTCCGGCACCGCGTCACAGTGGTGGAGGCCCAGGGGAAGGCCCTGATCGAACAGAAGGTAGAACTGGAGGCAGATCTGCAAACCAAGGAGCAGGAGATGGGCAGCCTGCGGGTGGAGCTCGGGAAGCTGAGAGAGAGGCTGCAGGGCGAGCTCAGCCAGAACGGAGAGGAAGAGCCTGTGACCGTCAGAGAGAATATTCCAGCTCTCATGGAATTTTTGACTCTTATCTCACACCTCTCAACTCCTTCCAGTGAAGAAATAGAAGAGGAAAATCGAATACCCCAACCTCCACCCGTCACCCACCCGAGAATGTCCCCCCAGCCGGAGTCTGGGATCAAGCGACTGTTTAGCTTCTTCTCCCGAGATAAGAAGCGTCTGGCCAACACGCAGAGAAACGTGCGCATCCACGAGTCCTTTGGCCAGTGGGCCAACTGCCACCGCGACGACGGTTACACGGAGCAAGGACAGGAGGCCCTGCAGCACCTGTGA

Related Sequences

bmy_01477T0 Protein

Length: 360 aa      View alignments
>bmy_01477T0
MEEDRGSALAAESALEKNVAELTVMDVYDIASLVGHEFERVIDQHGCEAIARLMPKVVRVLEILEVLVSRHHVAPELDELRLELDRLRLERMDRIEKERKHQKELELVEDVWRGEAQDLLSQIAQLQEENKQLMTNLSHKDVSFSEEEFQKHEGMSERERQVMKKLKEVVDKQRDEIRAKDRELGLKNEDVEAINHDLRHRVTVVEAQGKALIEQKVELEADLQTKEQEMGSLRVELGKLRERLQGELSQNGEEEPVTVRENIPALMEFLTLISHLSTPSSEEIEEENRIPQPPPVTHPRMSPQPESGIKRLFSFFSRDKKRLANTQRNVRIHESFGQWANCHRDDGYTEQGQEALQHL*