Part of scaffold_35 (Scaffold)

For more information consult the page for scaffold_35 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DDX55 ENSTTRG00000007251 (Bottlenosed dolphin)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box polypeptide 55

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006861, Bottlenosed dolphin)

Protein Percentage 97.75%
cDNA percentage 97.81%
Ka/Ks Ratio 0.2054 (Ka = 0.0108, Ks = 0.0524)

BT.74315 ENSBTAG00000007266 (Cow)

Gene Details

ATP-dependent RNA helicase DDX55

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009556, Cow)

Protein Percentage 95.12%
cDNA percentage 93.18%
Ka/Ks Ratio 0.10273 (Ka = 0.0238, Ks = 0.2315)

DDX55  (Minke Whale)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box polypeptide 55

External Links

Gene match (Identifier: BACU013658, Minke Whale)

Protein Percentage 99.25%
cDNA percentage 98.87%
Ka/Ks Ratio 0.12899 (Ka = 0.0037, Ks = 0.0287)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1602 bp    Location:2163689..2182976   Strand:+
>bmy_01479
ATGGAGCACGTGACGGAGGGTTCCTGGGAGTCGCTCCCGGTGCCGCTGCACCCGCGGGTGCTGGGTGTCCTGCGGGAGCTGGGTTTCCCGTACATGACGCCGGTGCAGTCTGCAACCATCCCTCTGTTCATGAAAAACAAAGATGTTGCTGCAGAAGCGGTCACAGGTAGTGGCAAAACACTCGCTTTCATCATCCCCATCCTGGAAATTCTCCTGAGAAGGGACGAGAAGTTAAAAAAGAGTCAGGTTGGCGCCATAATCATCACACCCACGCGAGAGCTGGCTGTTCAGATAGATGAGGTCCTGTCGCATTTCACGAAGCCCTTCCCACAGTTCAGCCAGATTCTCTGGATCGGAGGCAGGAATCCTGGAGAGGATGTTGCGAGGTTTAAGGAACACGGTGGGAACATCATTGTGGCAACCCCAGGCCGCCTGGAGGACATGTTCCGAAGGAAGGCAGAGGGCCTGGATCTGGCCAGCTGCGTGAGGTCCCTGGAGGTCCTGGTGTTGGATGAAGCAGACAGGCTTCTGGATATGGGGTTCGAGGCGAGCATAAACACCATCTTGGAGTTTTTGCCAAAGCAGAGGAGAACGGGCCTCTTCTCGGCCACTCAGACGCAAGAAGTGGAGAACCTGGTGAGAGCAGGCCTCCGGAACCCCGTGCGCATCTCGGTATGTAAGGCAGATGAGAAATTTAATCAGCTGGTACATTTTCTTCGAAATCATAAGCAGGAAAAACACCTGGTCTTCTTCAGTGGGATTTTAGTGTGCACGGACGTGATGGCCCGAGGAATAGATATTCCTGAAGTAAACTGGGTTTTGCAGTACGACCCTCCCAGCAATGCCAGCGCCTTCGTGCATCGCTGTGGCCGCACAGCCCGCATCGGCCATGGCGGCAGCGCGCTTGTGTTCCTCCTTCCCATGGAAGAGTCGTACGTCAATTTCCTTGCACTTAACCAGAAATGCCCCCTGCAGGAGATGAAAGTCCAGAAGAACACAGTAGACCTCCTTCCAAAGCTCAAGTCCATGGCCCTGGCCGACAGAGCTGTGTTTGAAAAGGGCATGAAAGCTTTTGTGTCGTACGTCCAGGCTTATGCAAAGCATGAGTGTAACCTCATCTTCAGATTAAAGGATCTCGATTTTGCAAGTCTTGCTCGAGGTTTTGCCCTGCTGAGGATGCCCAAGATGCCGGAGCTGAGAGGGAAGCAGTTTCCAGATTTCGTGCCCGTGGACGTCAGTACAGACACTATTCCATTTAAAGATAAAATCAGAGAAAAGCAGAGGCAGAAGCTATTGGAGCAACAAAGAAAAGAGAAAACAGAAAATGAAGGGAGAAGAAAATTCGTAAAAAATAAAGCTTGGTCAAAGCAGAAGGCCAAAAAGGAAAAGAAGAAAAAACTGAATGAAAAACGGAAAAGGAAAGAGGGTTCTGATATCGAAGATGAGGACATGGAAGAACTTCTTAATGACACAAGGCTCTTGAAAAAGTTTAAAAAAGGCAAAATTACTGAAGAAGAATTCGAGAAGGGGCTGTTGACAAGTGGCAAAAGATCAGTCAAGACAGCAGATTTGGGGATCTCAGATTTGGAAGATGACTGCTGA

Related Sequences

bmy_01479T0 Protein

Length: 534 aa      View alignments
>bmy_01479T0
MEHVTEGSWESLPVPLHPRVLGVLRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFIIPILEILLRRDEKLKKSQVGAIIITPTRELAVQIDEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKEHGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLEVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVCKADEKFNQLVHFLRNHKQEKHLVFFSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEESYVNFLALNQKCPLQEMKVQKNTVDLLPKLKSMALADRAVFEKGMKAFVSYVQAYAKHECNLIFRLKDLDFASLARGFALLRMPKMPELRGKQFPDFVPVDVSTDTIPFKDKIREKQRQKLLEQQRKEKTENEGRRKFVKNKAWSKQKAKKEKKKKLNEKRKRKEGSDIEDEDMEELLNDTRLLKKFKKGKITEEEFEKGLLTSGKRSVKTADLGISDLEDDC*