Part of scaffold_36 (Scaffold)

For more information consult the page for scaffold_36 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNUPN ENSTTRG00000011484 (Bottlenosed dolphin)

Gene Details

snurportin 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010889, Bottlenosed dolphin)

Protein Percentage 90.12%
cDNA percentage 92.91%
Ka/Ks Ratio 0.86552 (Ka = 0.027, Ks = 0.0312)

SNUPN ENSBTAG00000021293 (Cow)

Gene Details

Snurportin-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028371, Cow)

Protein Percentage 91.04%
cDNA percentage 94.33%
Ka/Ks Ratio 0.43464 (Ka = 0.0453, Ks = 0.1043)

SNUPN  (Minke Whale)

Gene Details

snurportin 1

External Links

Gene match (Identifier: BACU017886, Minke Whale)

Protein Percentage 98.51%
cDNA percentage 99.3%
Ka/Ks Ratio 0.99092 (Ka = 0.0071, Ks = 0.0071)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1008 bp    Location:691991..672646   Strand:-
>bmy_01512
ATGGAAGAGCTGAGTCAAGCCCTGGCTAGTAGCTTTTCTGTGTCTCAAGATCTGAACAGCACAGCTGCCCCACACCCCCGCCTGTCCCAGTACAAGTCCAAGTACAGTTCCTTGGAGCAGAGTGAGCGGCGCCGCCGGTTACTGGAACTGCAGAAATCAAAGCGGCTGGATTATGTGAACCATGCCAGAAGACTGGCTGAAGATGACTGGACAGGGATGGAGACTGAGGAAGAAGAAGAAAAGAAAGATGATGAGGAAATGGACATTGACACTGGCAAGAAGTTACCAAAACTCTATGCTAATCAATTAATGCTCTCAGAGTGGTTAATTGACGTCCCTTCAGATTTGGGTCAGGAATGGATTGTGGTCGTGTGCCCTGTTGGAAAAAGAGCCCTTATTGTGGCCGCCAGGGGTTCTACCAGTGCCTACACCAAGAGTGGCTACTGCGTCAACAGGTTTTCTTCCCTTCTGCCAGGAGGCAGCAGGCGAAACTCAGCAACAACAAAAGACTACACCATTCTGGACTGCATTTACAGTGAGGTGAACCAGACCTACTACGTTCTGGACGTGATGTGCTGGCGGGGACACCCTTTTTATGACTGCCAGTTTAAATTTGTGGGGCTGAAGAATTTCCCTTGTACCCCTGAGAGCCTGTGTAAGGTGCTGTCTATGGATTTCCCTTTTGAGGTAGATGGGCTTCTCTTCTACCACAAGCAGACCCACTATAGCCCTGGAAGCACTCCTCTGGTGGGCTGGCTGCGCCCCTACATGGTGTCAGATGTTCTTGGCGTAGCTGTGCCAGCTGGCCCGCTGACTGCCAAGCCAGAATATGCTGGGTACCAGCTCCAGCAGATTATTGAGCACAAGAGGAGCCAGAAGGAGGGAATAAAGGAGCTCACACACAAGCCCTCTGAGAATGGACGCTATGAGTTGGAGCACCTGTCTACCCCCAAGCTGAAGAGCCCTCCCCATAGCCCCAAGCACCCAGGGAGCCTCATGGAGAACTAG

Related Sequences

bmy_01512T0 Protein

Length: 336 aa      View alignments
>bmy_01512T0
MEELSQALASSFSVSQDLNSTAAPHPRLSQYKSKYSSLEQSERRRRLLELQKSKRLDYVNHARRLAEDDWTGMETEEEEEKKDDEEMDIDTGKKLPKLYANQLMLSEWLIDVPSDLGQEWIVVVCPVGKRALIVAARGSTSAYTKSGYCVNRFSSLLPGGSRRNSATTKDYTILDCIYSEVNQTYYVLDVMCWRGHPFYDCQFKFVGLKNFPCTPESLCKVLSMDFPFEVDGLLFYHKQTHYSPGSTPLVGWLRPYMVSDVLGVAVPAGPLTAKPEYAGYQLQQIIEHKRSQKEGIKELTHKPSENGRYELEHLSTPKLKSPPHSPKHPGSLMEN*