Part of scaffold_36 (Scaffold)

For more information consult the page for scaffold_36 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CSPG4 ENSBTAG00000012219 (Cow)

Gene Details

chondroitin sulfate proteoglycan 4 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016206, Cow)

Protein Percentage 87.43%
cDNA percentage 88.84%
Ka/Ks Ratio 0.17332 (Ka = 0.0673, Ks = 0.3885)

CSPG4  (Minke Whale)

Gene Details

chondroitin sulfate proteoglycan 4

External Links

Gene match (Identifier: BACU017883, Minke Whale)

Protein Percentage 96.13%
cDNA percentage 96.74%
Ka/Ks Ratio 0.31747 (Ka = 0.0231, Ks = 0.0728)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 6900 bp    Location:766186..742852   Strand:-
>bmy_01515
ATGTGGCTGGGAGCCCAGGGCACCAACCCTGCCCCTGTCGATGTCTGTGGACCAAGCTCAGCATCTCCCACCCCACCCGTTCCCTGCTTCCTCTCCTGGGGTACTCACCTTCCAGAGGGGATCCCTGAATTGGAAATGTTCCCCAGTGTACGCCACTCAGCATGGGTGGCCTCCGGATGCTTGATTGCTTCTCCTCTGGAGCCTCAGTTTGTCTGTCTGGTCAGATTTATCCTGGGCCAGGAGGAGGTGAGGATGCAGACCCTGGCAGAGACACTGCTGAGCGACTCCATTCCCCACACTGTGGGGCTGACCGTGTCAGACAGCTGGGCCTTGTTGTCAGTCGATGGGCTCCTGAATGCCTCCGCCCAAGTCCAGCAGGCCCCCCTGGAGGTCCCCTATGGGCTCTTCCTGGGGGGCACCGGGAACCTTGGCCTGCCCTACCTGAGCAGAGCCAGCCGACCCCTGCGGGGTTGCCTCCACACAGCCACCCTCAATGGCCGCAGCCTCCTTCGGCCACTGACCCCAGACGTACCCGAGGGCTGTGCTGAGGAGTTCTCTGCCGGTGATGACGTGCCCATGGGCTTCTCTGGGCCCCACTCACTGGCTGCCTTCCCTGCCTGGGGCACTCGGGATGAAGGCACCCTGGAGTTTACACTCACCACACGGAGCTGGCAGGCACCCCTGGCCTTCCAGGCAGGGGGCCGGCATGGGGACTTCATCTACGTGGACATATTTGAGGGCCACCTGCGGGCTGTGGTGGAGAAGGGCCAGGGCACCGTATTGCTCCACAACAGTGTGCCTGTGGCCGATGGGCAGCCCCACGAGGTCAGTGTCCACATGGATGCTCACAGGCTGGAAATCTCCGTGGACCAGTACCCCACACGTACTTCCAACCGTGGGGTCCTTAGCTACCTAGAGCCACGAGGCAGTCTCCTCCTTGGGGGGCTGGATGCAGAGGGCTCTCGCCATCTCCGGGAACACCGCCTGGGCCTGGCTGTCAACGTCTCCCTGCTGGGCTGCCTGGAGGATCTCAGCATCAATGGTCAGAGGTGGGGGCTCCGGGAAGCCTTGCTGACTCGCAGCATGGCGGCCGGCTGCAGGCTGGAGGAGGACGAGTACGAGGAGGATGCCTATGGCCCATACGGAGCTTTCTCCACCCTGGCACCCGAGGCTTGGCCGGCCATGGAGCTGCCTGAGCCCTGCGCCCCTGAACCGGGGCTGCCTCCGATCTTTGACAATTTCACCCAGCTGCTGACCGTCCGCCCACTGGTGGTGGCTGAGGGCGGCACAGCCTGGCTGGAGTGGCGGCACGTGCAGCCCACGCTGGATCTGAGTGAGGCCGAGCTGCGCAAATCCCAGGTGCTGTTCAGCGTGAGCCGCGGGGCCCGCCACGGCGAGCTAGAGCTGGACATCCCAGGTGCCCAGGCACGGAAAATGTTCACCCTCCTGGACGTGGTGAACCGCAAGGCCCGCTTCGTCCACGATGGCTCCGAGGACACCTCCGACCAGCTGGTGCTCGAGGTGTCGGTGACAGCTCGGGGGCCCGTGCCCTCCTGCCTTCGGAGGGGCCAAACTTACATCCTGCCCATTCAGATAAACCCCGTCAACGACCCGCCCCGCGTCGTCTTCCCGCAAGGCAGCCTCATGGTGATCCTGGAACACACTCAGAAGCTGCTGGGGCCAGAGGTCTTCCAGGCCGATGACCCAGACTCCGCCTGCGAGGGCCTCACCTTCCAGCTCCTCGGTGTCCCGGCCGGCCTCCCCGTGGAGCGCCAAGACCAGCCTGGGGAGCCAGCGACCGAGTTCTCCTGCCGGGAGCTGGATGCGGGCAGCCTAGTGTACGTCCACCGCGGCGGGCCCGCCCCGGACCTGACGTTCCGGGTCAGCGACGGGCTGCAAGCCAGCCCGCCGGTCACGCTGAAGGTGGTGGCCATCCGGCCGGCCATTCGGGTCCGCCACAACACAGGGCTGCACCTGGCCCAGGGCTCCACTGCACCTGTCTTGCCCTCCAACCTGTCGGTTGAGACAAATGCTGTGGGGCAGGATGTGAGCGTGCTGTTCCGACTCACCGGGGCCCTGCAGTTCGGAGAGCTGCAGAAGCAGGGGGCGGGGGGGGCGGAGGGCACCGAGTGGCGAGCCACACAGGCCTTCCACCAGCGGGACGTGGAGCAGGGCCGCGTGAGGTACCTGAGCACTGACCCGCAGCACCGCGCCGAGGACACCGTGGAGAACGTGGCCCTGGAGGTGCAGGTGGGCCAGGAGACCCTGAGCGATCTGTCCTTCCCAGTGACAGTCCAGAGAGCCACCGTGTGGCTGCTGCGGCTGGAGCCTCTACACCCCCAGAACGCCCAGCAGGAGGCCATCACCACAGCCCACCTGGAAGCCACCCTGGAGGAGGCAGGCCCGAACCCCACCACCTTCCACTATGAGGTGGTTCAGGCCCCCAGGAAGGGTAATCTTCAGCTACAGGGCACGCGGCTGTCAGACGGTCAGAGCTTCACCCAGGATGACCTGCGGACTGGCCGGTTGACTTATGGGGCCACAGCACGTGTCTCAGAGGCAGTCGAGGACTCCTTCCGTTTCCGGGTCACAGCCCCGCCACACTTCTCCCCACTCTACACGTTCCCCATCCACATCGGTGGTGATCCGGACGCCCCTGTCCTCACCAACGTCCTCCTCTCAGTGCCTGAGGGCGGCGAGGGCGTCCTCTCTGCTGATCACCTCTTTGTCAAGAGTCTCAACAGTGCCAGCTACCTCTATGAGGTCATGGAGCGGCCCCGCCACGGCAGGTTGGTGTGGCAGGGGGCACAGGACAGTGTCACCGTGGTGACATCCTTCACCAATGAGGACCTGCTGCACGGCCGGCTGGTCTACCAGCATGACGACTCTGAGACCACAGAAGATGACATTCCCTTTGTGGCTACCCGCCAGGGCGAGGGCAGTGGCGACATGGCCTGGGAGGAGGTACGGGGTGTCTTCCGGGTGGCCATCCAGCCCGTGAATGACCACGCCCCTGTGCAGACCATCAGCCGCGTCTTCCACGTGGCCCGCGGTGGGCAGCGGCTGCTGACCACCGACGACATGGCCTTCAGCGATGCTGACTCCGGCTTTGCTGATGCTCAGCTGGTGCTGACCCGCAAGGACCTCCTCTTCGGCAGCATCGTGACTGTAGATGAGCCCACTCGGCCCATCTACCGCTTCACCCAGGAGGACCTCAGGAAGAGGCGGGTCCTGTTCGTGCACTCGGGGGCCGACCGCGGCTGGATCCAGCTGCAGGTGTCCGATGGGCAGCACCAGGCCACAGCGCTGCTCGAAGTGCAGGCCTCGGAGCCCTACCTCCGTGTGGCCAACGGCTCCAGCCTTGTGGTCCCTCAAGGAGGCCAGGGCACCATCGACACAGCTGTGCTCCACCTGGACACCAACCTAGATATCCGCGGTGGGGATGAGGTCCACTACCATGTCACAGCCGGCCCACGCTGGGGGCGGCTGCTCAGGGGCGGCCAGCCAGTCACAACCTTCTCCCAGCAGGACCTGCTGGATGGTGCCATTCTCTACAGCCACAACGGCAGCCTCAGCCCCCGTGATACCCTGGCCTTCTCTGTGGAGGCAGGGCCTGTGCACACAGATGCCGCCCTACAAGTGACCATTGCCCTAGAGGGGCCACTGGCCCCACTGCACCTGGTCCAGAACAAGAAGATCTATGTCTTCCAGGGGGAGGCGGCTGAGATCAGAAGAGACCAGCTGGAGGCAGCCCAGGAGGCAGTGCCACCGGCAGACATTGTGTTCTCAGTGAAGACCCCACCAAGCTCTGGCCACCTGGTGATGTTGTCCCACAGCGCCACGGCAGCCGAGCTGCCCAGCCTGGACCCTGTGCACAGCTTCTCACAGGAGGCGGTGGACGCGGGCAGGGTCCTGTACCTGCACTCCCGCCCTGAGGCCTGGAGCGATGTCTTCTCCCTGGATGTGTCCTCAGGCCTGGGTGCTCCCCTCGAGGGCGTCCACGTGGAGCTGGAGGTGCTGCCCGCTGCCATCCCACTGGAGGCGCTGAACTTCAGCGTCCCCGAGGGCGGCACCCGCACGCTGGCCCCTCCACTGCTCCGCATCACTGGGCCCTACTTCCCCACGCTGCCGGGCCTTAACCTGCAGGTGCTGGAGCCACCCCAGCATGGGGTCCTGCAGAGAGAGGAAGGACCTCAAGACAGGACCCTCAGCACCTTCTCCTGGAGAGAGGTAGAACAGCAGCTGATTCTCTATGTGCATGACGGGAGCGAGACGCTGGCAGACAGTTTCGTCCTAGTGGCTAATGCCTCAGAGGTGGACCGCCAGAGCCATCCCGTGACCTTCACCATCACCGTCCTGCCTGTCAACGACCAACCCCCCATGTGGGAGGGGGCCACTGTGCCCATCCCTCCGGAGGCCCTTAGGGGCACAGACAGCGACTCAGGCCCCGAGGACCTGGTCTACACCCTTGAGGATCCCAGCAATGGACAGGTGGTGCTGCGGACAGAGCCGGGCGCCGAGGTCCACAGCTTCACCCAGGCCCAGCTCGACGGCGGGATCGTGCTGTTCTCACACAGAGGAGCCCCGGACGGAGGCTTCCGCTTCATCCTATCTGATGGCGAGCATACTTCCACTGGACACTTCTTCCGGGTGACGGCCCAGAAGCAGCTGCTCCTCTCACTGGAGGGCAGCCAGACGCTGACCATCTGCCCAGGGTCCATCCAGCCGCTCAGCAGCCAGAGCCTGAGAGCCAGTTCCAGCACAGGCATCGACCCCCACCACCTGTTCTACCGTGTGGTACGGGGCCCCCGGCTTGGCCGGCTATTCCACACCCAGCAGGGCAGCACCGGGGAGGCCCTGGAGAATTTCACTCAGGCAGAGGTGTATGCTGGGAATGTTCTGTATGAGCACGAGATGCCCCCCGAGCCCTTCTGGGAGGCCCATGACGCCCTGGAGCTCCGGCTATCCTCACCGCCTGCCCCCGACATGGCCGCCACCCTTGCTGTGACTGTGTCTTTTGAAGCTACCTGTCCCCAGCACCCCAGCCGCCTCTGGAAGAACAAAGGTCTCTGGGTCTCGGAAGGCCAGCGAGCCGAAATCACCACAGCCGCCCTCGATGCCTCCAACTTCCTGGCCAGCGTTCCGGCACCCCGGCGCTCGGAACACGATGTGCTCTTCCAGATCACACAGTTCCCCCAGCGGGGCCAGCTGATGGTGTCCAAGGAGCCCCTCCACACCGGGCGGCCCCACTTCCTGCAGTCTGAGCTGGCCGCAGGGCAGCTGGTGTACACCCACGGCGGCGGGGGCACCCAGCAGGATGGCTTCCGCTTCCGTGCCCACCTCCAGGGGCCTGCGGGGGCCTCCGTGGCGGGACCCCAAACCTCAGAGGCTTTCGCCATCACAGTGCGGGATGTGAATGAGCAGCCGCCTCAGCCGCAAACCTCCGTCCCGCTCCGGCTCACCCGGGGCTCCCGCAGCCCCGTCTCCCGGGCCCAGCTGAGCGTGGTGGACCCAGACTCGGCTCCTGGGGAGATCGAGTACAAGGTGCAGCGGGCCCCCCACAATGGCTTCCTGAGCCTGGCAGGGGCCAGCCCGGGGCCTGTGACCTGCTTCACCCAGGCTGACGTGGATGCAGGGCGGCTGGCCTTTGTGGCCAATGGGAGCAGCGTGGTGGGCATCTTCCAGCTGAGTGTGTCTGATGGGGCCAGCCCGCCCCTGCCCATGTCCCTGGCCGTGGACGTCTTGCCCTCGGCCATTGAGGTGCAGCTGCGGGCACCCCTAGAGGTGCCCCAAGCTTTAGGGCGCTCCTCCCTGAGCCGGCAGCAGCTCCGGGTGGTTTCCGATCGGGAGGAGGCGGACGCAGCCTACCGCCTCACCCAGGGGCCCCGGTATGGGCATCTCCTGGTGGGCGGGCAGCCTGCCGCAGCCTTCAGCCAGTTCCAGGTAGACCAGGGTGAAGTGGTCTTTGCTTTCACCAGCTTCTCCTCCTCTCACGACCAATTCAGCATCCTGGCACTGGCCAGGGGTGCCAACGCATCCGCCACGGTGAATGTCACCGTGAGGGCTCTGCTGCATGTGTGGACAGGTGGGCCGTGGCCCCAGGGTGCCACCCTACGCCTGGACCCCACTGTCTTAGATGCGGGCGAGCTGGCCAACCGCACAGGCAGTGTGCCGCGTTTCCGGCTCCTGGCGGGACCCCGGCACGGCCGCGTGGTCCGCGTGCCCCGGGCCAGGACAGAGCCCAGGGGCGGCCAACTTGTGGAGCAGTTCACCCAGCAGGACCTTGAGGACGGAAGGCTGGGGCTGGAGGTGGGCAGGCCAGAGGGTAGCTCTCCTGGACCTGCAGGCGACAGTCTCACTCTGGAGCTGTGGGCAAGGGGTGTCCCTCCTGCCGTGGCCTCACTGGACTTTGCCACGGAGCCTTACAACGCAGCCCGGCCCTACAGAGTGGCCCTGCTCAGTCTGCCTGAGGCCGCTCGGACAGAAGCAGGGGAGCCAGGGAGCAGCACCCCCACTGGTGAGCCAGGCCTGGCGGCCTCCAGCCCCGTGCCCACCGTGGCCAGGGGGCACTTCCTGGGCTTTCTCGAGGCCAACATGTTCAGCATCATCGTCCCYGTGTGCCTGATCCTCCTGCTCCTGGCACTCATCGTGCCTCTGCTTTTCTACCTCCGCAAACGCAACAAGACGGGCAAGCACGACGTCCAGGTGCTGACTGCCAAGCCCCGAAACGGCCTGGCCGGCGACACGGAGACCTTCCGCAAGATGGAGCCGGGCCAGGCCATCCCCCTCACAGCGGTGCCTGGCCAGGGGGCCCCGCCAGGGGGGCAGCCTGACCCAGAGCTGCTGCAGTTCTGCCGGACATCCAACCCTGCCCTCAAGAACGGCCAGTACTGGGTGTGA

Related Sequences

bmy_01515T0 Protein

Length: 2300 aa      View alignments
>bmy_01515T0
MWLGAQGTNPAPVDVCGPSSASPTPPVPCFLSWGTHLPEGIPELEMFPSVRHSAWVASGCLIASPLEPQFVCLVRFILGQEEVRMQTLAETLLSDSIPHTVGLTVSDSWALLSVDGLLNASAQVQQAPLEVPYGLFLGGTGNLGLPYLSRASRPLRGCLHTATLNGRSLLRPLTPDVPEGCAEEFSAGDDVPMGFSGPHSLAAFPAWGTRDEGTLEFTLTTRSWQAPLAFQAGGRHGDFIYVDIFEGHLRAVVEKGQGTVLLHNSVPVADGQPHEVSVHMDAHRLEISVDQYPTRTSNRGVLSYLEPRGSLLLGGLDAEGSRHLREHRLGLAVNVSLLGCLEDLSINGQRWGLREALLTRSMAAGCRLEEDEYEEDAYGPYGAFSTLAPEAWPAMELPEPCAPEPGLPPIFDNFTQLLTVRPLVVAEGGTAWLEWRHVQPTLDLSEAELRKSQVLFSVSRGARHGELELDIPGAQARKMFTLLDVVNRKARFVHDGSEDTSDQLVLEVSVTARGPVPSCLRRGQTYILPIQINPVNDPPRVVFPQGSLMVILEHTQKLLGPEVFQADDPDSACEGLTFQLLGVPAGLPVERQDQPGEPATEFSCRELDAGSLVYVHRGGPAPDLTFRVSDGLQASPPVTLKVVAIRPAIRVRHNTGLHLAQGSTAPVLPSNLSVETNAVGQDVSVLFRLTGALQFGELQKQGAGGAEGTEWRATQAFHQRDVEQGRVRYLSTDPQHRAEDTVENVALEVQVGQETLSDLSFPVTVQRATVWLLRLEPLHPQNAQQEAITTAHLEATLEEAGPNPTTFHYEVVQAPRKGNLQLQGTRLSDGQSFTQDDLRTGRLTYGATARVSEAVEDSFRFRVTAPPHFSPLYTFPIHIGGDPDAPVLTNVLLSVPEGGEGVLSADHLFVKSLNSASYLYEVMERPRHGRLVWQGAQDSVTVVTSFTNEDLLHGRLVYQHDDSETTEDDIPFVATRQGEGSGDMAWEEVRGVFRVAIQPVNDHAPVQTISRVFHVARGGQRLLTTDDMAFSDADSGFADAQLVLTRKDLLFGSIVTVDEPTRPIYRFTQEDLRKRRVLFVHSGADRGWIQLQVSDGQHQATALLEVQASEPYLRVANGSSLVVPQGGQGTIDTAVLHLDTNLDIRGGDEVHYHVTAGPRWGRLLRGGQPVTTFSQQDLLDGAILYSHNGSLSPRDTLAFSVEAGPVHTDAALQVTIALEGPLAPLHLVQNKKIYVFQGEAAEIRRDQLEAAQEAVPPADIVFSVKTPPSSGHLVMLSHSATAAELPSLDPVHSFSQEAVDAGRVLYLHSRPEAWSDVFSLDVSSGLGAPLEGVHVELEVLPAAIPLEALNFSVPEGGTRTLAPPLLRITGPYFPTLPGLNLQVLEPPQHGVLQREEGPQDRTLSTFSWREVEQQLILYVHDGSETLADSFVLVANASEVDRQSHPVTFTITVLPVNDQPPMWEGATVPIPPEALRGTDSDSGPEDLVYTLEDPSNGQVVLRTEPGAEVHSFTQAQLDGGIVLFSHRGAPDGGFRFILSDGEHTSTGHFFRVTAQKQLLLSLEGSQTLTICPGSIQPLSSQSLRASSSTGIDPHHLFYRVVRGPRLGRLFHTQQGSTGEALENFTQAEVYAGNVLYEHEMPPEPFWEAHDALELRLSSPPAPDMAATLAVTVSFEATCPQHPSRLWKNKGLWVSEGQRAEITTAALDASNFLASVPAPRRSEHDVLFQITQFPQRGQLMVSKEPLHTGRPHFLQSELAAGQLVYTHGGGGTQQDGFRFRAHLQGPAGASVAGPQTSEAFAITVRDVNEQPPQPQTSVPLRLTRGSRSPVSRAQLSVVDPDSAPGEIEYKVQRAPHNGFLSLAGASPGPVTCFTQADVDAGRLAFVANGSSVVGIFQLSVSDGASPPLPMSLAVDVLPSAIEVQLRAPLEVPQALGRSSLSRQQLRVVSDREEADAAYRLTQGPRYGHLLVGGQPAAAFSQFQVDQGEVVFAFTSFSSSHDQFSILALARGANASATVNVTVRALLHVWTGGPWPQGATLRLDPTVLDAGELANRTGSVPRFRLLAGPRHGRVVRVPRARTEPRGGQLVEQFTQQDLEDGRLGLEVGRPEGSSPGPAGDSLTLELWARGVPPAVASLDFATEPYNAARPYRVALLSLPEAARTEAGEPGSSTPTGEPGLAASSPVPTVARGHFLGFLEANMFSIIVPVCLILLLLALIVPLLFYLRKRNKTGKHDVQVLTAKPRNGLAGDTETFRKMEPGQAIPLTAVPGQGAPPGGQPDPELLQFCRTSNPALKNGQYWV*