Sequence details bmy_01517 (Coding sequence)

Part of scaffold_36 (Scaffold)

For more information consult the page for scaffold_36 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LINGO1 ENSTTRG00000010110 (Bottlenosed dolphin)

Gene Details

leucine rich repeat and Ig domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009583, Bottlenosed dolphin)

Protein Percentage 84.4%
cDNA percentage 84.16%
Ka/Ks Ratio 0.10223 (Ka = 0.01, Ks = 0.098)

LINGO1 ENSBTAG00000023147 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000043683, Cow)

Protein Percentage 98.58%
cDNA percentage 95.11%
Ka/Ks Ratio 0.01362 (Ka = 0.0075, Ks = 0.5495)

LINGO1  (Minke Whale)

Gene Details

leucine rich repeat and Ig domain containing 1

External Links

Gene match (Identifier: BACU017880, Minke Whale)

Protein Percentage 98.8%
cDNA percentage 97.83%
Ka/Ks Ratio 0.06421 (Ka = 0.0068, Ks = 0.1065)

Additional orthologs identified in other species via the OPTIC pipeline.

LINGO1 (Human)   Lingo1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1272 bp    Location:1041114..1043235   Strand:+
Raw sequence 
>bmy_01517
ATGCTGGCGGGGGGCGTGAGGAGCATGCCCAGCCCCCTCCTGGCCTGCTGGCAGCCCATCCTCCTGCTGGTACTGGGCTCGGTGCTGTCAGGCTCAGCCACAGGCTGCCCGCCCCGCTGCGAGTGCTCTGCCCAGGACCGCGCAGTGCTCTGCCACCGCAAGCGCTTTGTGGCGGTGCCTGAGGGCATCCCCACTGAGACCCGCCTGCTGGACCTGGGCAAGAACCGCATCAAAACGCTCAACCAGGACGAGTTTGCCAGCTTCCCGCACCTGGAGGAGCTGGAGCTCAATGAGAACATCGTGAGCGCTGTGGAGCCTGGCGCCTTCAACAACCTCTTCAACCTCCGGACGCTGGGGCTCCGCAGCAACCGCCTGAAGCTCATCCCCCTGGGCGTCTTCACCGGCCTCAGTAACCTGACCAAGCTGGACATCAGCGAGAACAAGATCGTCATCCTGCTGGACTACATGTTCCAGGACCTGTACAACCTSAAGTCACTGGAAGTCGGYGACAACGACCTCGTCTACATCTCCCACCGAGCCTTCAGCGGCCTCAACAGCCTGGAGCAGCTGACGCTGGAGAAATGCAACCTGACCTCCATCCCCACTGAGGCGCTGTCCCACCTGCACGGTCTCATCGTCCTGCGGCTCCGGCACCTCAACATCAATGCCATCCGGGACTATTCCTTCAAGAGGTTGTACCGGCTCAAGGTCTTGGAGATCTCTCACTGGCCCTACTTGGACACCATGACTCCCAACTGTCTCTACGGCCTCAACCTGACGTCCCTGTCTATCACGCACTGCAACCTGACCGCTGTGCCCTACCTGGCGGTGCGCCACCTGGTCTATCTCCGGTTCCTCAACCTCTCCTACAACCCCATCAGCACCATTGAGGGCTCCATGTTGCACGAGCTGCTAAGGCTGCAGGAGATCCAGCTGGTGGGTGGGCAGCTGGCCGTGGTGGAGCCCTACGCCTTCCGCGGCCTCAACTACCTGCGCGTGCTCAATGTCTCCGGCAACCAGCTGACCACACTGGAGGAGTCGGCCTTCCACTCGGTGGGCAACCTGGAGACGCTCATCCTGGACTCCAACCCGCTGGCCTGCGACTGCCGGCTCCTGTGGGTGTTCCGGCGCCGCTGGCGGCTCAACTTCAACCGGCAGCAGCCCACGTGTGCCACGCCCGAGTTCGTCCAGGGCAAGGAGTTCAAGGACTTCCCTGATGTGCTCCTGCCCAACTACTTCACCTGCCGCCCTAGTCGGAATGCAAACTTTTGA

Related Sequences

bmy_01517T0 Protein

Length: 424 aa      View alignments
>bmy_01517T0
MLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFTCRPSRNANF*