Part of scaffold_39 (Scaffold)

For more information consult the page for scaffold_39 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC1A4 ENSTTRG00000008269 (Bottlenosed dolphin)

Gene Details

solute carrier family 1 (glutamate/neutral amino acid transporter), member 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007826, Bottlenosed dolphin)

Protein Percentage 81.71%
cDNA percentage 84.07%
Ka/Ks Ratio 0.58569 (Ka = 0.1583, Ks = 0.2703)

SLC1A4 ENSBTAG00000007763 (Cow)

Gene Details

Neutral amino acid transporter A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010206, Cow)

Protein Percentage 80.1%
cDNA percentage 82.77%
Ka/Ks Ratio 0.39709 (Ka = 0.1504, Ks = 0.3787)

SLC1A4  (Minke Whale)

Gene Details

solute carrier family 1 (glutamate/neutral amino acid transporter), member 4

External Links

Gene match (Identifier: BACU019427, Minke Whale)

Protein Percentage 81.02%
cDNA percentage 83.86%
Ka/Ks Ratio 0.61206 (Ka = 0.1631, Ks = 0.2665)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1239 bp    Location:2165617..2184340   Strand:+
>bmy_01565
ATGCTTCCTGGGTCCGGGGACTCGCTGGGTAAACATTTTAAAATTGCTTCCGTCAAAGAAACCTCACGGATGCCAATTTTATGTGACTCCAGGCATGTTCCCTGGCAAAGGCAGGGCGCAGTCCTTTCTGCCTGTGGGCAAGAAATTCAGAATGCCGTTGCCAAGTGGTTTGATTTCCCAACACAGTGTATTAGAAATAGCGTAGCAGACTGGGGCATGGAGGTGTACATAGAGTGTCGTATCCTGTTCCGAAGAGTCTTTGAAATTTTCATAAATTCGATCCCCATTGGCACCGAAATTGAAGGTATGAACATTTTAGGATTGGTCCTTTTTGCCCTGGTGTTAGGAGTGGCCCTGAAGAAACTCGGCTCTGAAGGAGAAGAGCTCATTCGTTTTTTCAATGCCCTCAATGAGGCGACGATGGTGCTGGTGTCATGGATTATGTGGTACGTACCTGTGGGCATCATGTTCCTGGTGGGAAGCAAGATTGTGGAAATGAAGGACATCGTCGTGCTGGTGACCAGCCTGGGGAAATATATCTTCACATCTATATTGGGCCATTTTATTCACGGAGGAATTGTTCTGCCACTTATTTATTTTGTCTTCACGAGAAAAAACCCATTCAGGTTCCTCCTGGGCCTCCTCACACCATTTGCAACAGCATTTGCCACCTGCTCCAGCTCTGCAACCCTCCCCTCTATGATGAAGTGCATTGAAGAAAACAATGGTGTAGACAAGAGGATCGGCAGGTTCATCCTCCCCATCGGGGCCACTGTGAACATGGACGGGGCAGCCATCTTCCAGTGTGTGGCCGCAGTGTTCATTGCCCAGCTCAACAACGTGGAACTGAAAGCAGGCCAGATTTTCACCATTCTAGTGACAGCCACAGCGTCCAGTGTTGGAGCAGCAGGCGTGCCAGCTGGAGGGGTCCTCACCATCGCCATTATCCTGGAGGCCATTGGGCTGCCCACTCATGACCTCTCTCTGATCCTGGCTGTGGACTGGATTGTGGACCGCACCACCACCGTGGTGAACGTGGAGGGCGATGCCCTGGGTGCAGGCATCCTCCACCACCTGAATCAGAAGGCGACGAAGAGAGGCGAGCAGGAGCTGAGGGAGGTCAAAGTGGAGGCCGTCCCCAACTGCAAGTCGGAGGAGGAGACGTCACCCCTGGTGACACACCCAAACCCCACCGGCCTTGCGGCCAGCACCCCCGAGTCCAAGGAGTCAGTTCTGTGA

Related Sequences

bmy_01565T0 Protein

Length: 413 aa      View alignments
>bmy_01565T0
MLPGSGDSLGKHFKIASVKETSRMPILCDSRHVPWQRQGAVLSACGQEIQNAVAKWFDFPTQCIRNSVADWGMEVYIECRILFRRVFEIFINSIPIGTEIEGMNILGLVLFALVLGVALKKLGSEGEELIRFFNALNEATMVLVSWIMWYVPVGIMFLVGSKIVEMKDIVVLVTSLGKYIFTSILGHFIHGGIVLPLIYFVFTRKNPFRFLLGLLTPFATAFATCSSSATLPSMMKCIEENNGVDKRIGRFILPIGATVNMDGAAIFQCVAAVFIAQLNNVELKAGQIFTILVTATASSVGAAGVPAGGVLTIAIILEAIGLPTHDLSLILAVDWIVDRTTTVVNVEGDALGAGILHHLNQKATKRGEQELREVKVEAVPNCKSEEETSPLVTHPNPTGLAASTPESKESVL*