Sequence detailsbmy_01576 (Coding sequence)

Part of scaffold_40 (SequenceType object (1))

For more information consult the page for scaffold_40 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DEPDC5ENSTTRG00000010301 (Bottlenosed dolphin)

Gene Details

DEP domain containing 5

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009776, Bottlenosed dolphin)

Protein Percentage 91.64%
cDNA percentage 91.8%
Ka/Ks Ratio 0.29379 (Ka = 0.029, Ks = 0.0988)

DEPDC5ENSBTAG00000001295 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000001707, Cow)

Protein Percentage 92.45%
cDNA percentage 89.73%
Ka/Ks Ratio 0.11082 (Ka = 0.0454, Ks = 0.4098)

DEPDC5 (Minke Whale)

Gene Details

DEP domain containing 5

External Links

Gene match (Identifier: BACU003310, Minke Whale)

Protein Percentage 95.58%
cDNA percentage 96.19%
Ka/Ks Ratio 0.39604 (Ka = 0.0296, Ks = 0.0749)

Additional orthologs identified in other species via the OPTIC pipeline.

DEPDC5 (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 4536 bp    Location:300694..210193   Strand:-
Raw sequence 
>bmy_01576
ATGGCGAAACGGAGGCAAGATGATTTCTCTCCCCCAAGCTTGGAACAGCTGAAGGAAACAACAGTACAAGATGAGAACAACAAAGGTCTACAAACTTGTCATCCACAAGAAGGGCTTTGGGGGCAGTGGTCAGTATTGATTGGTCTTAGGCGGGTTGTATGGCTGAATTGTCTTTCAGATGATGAGCTAGTCGTGAACCCCAAAGTGTTTCCTTACATCAAGCTTGGAGACATTGTGGAGATTGCTCACCCCAACGATGAGTACAGCCCTCTGCTTTTGCAGGTCAAGTCACTTAAGGAGGATTTGCAGAAAGAAACTATCAGTGTGGACCAGACCGTGACTCAAGTGTTTCGGCTAAGACCTTATCAAGATGTGTATGTGAATGTCGTAGACCCTAAGGATGTGACCCTTGACCTAGTGGAATTAACCTTTAAGGATCAATATATTGGCCGTGGGGATATGTGGCGATTGAAGAAAAGCTTGGTCAGCACATGTGCCTATATCACTCAGAAGGTGGAATTTGCTGGCATCAGGGCACAGGCCGGGGAGCTGTGGGTCAAGAATGAGAAGGTCATGTGTGGTTATATAAGCGAAGATACCAGGTTGGAAAAATCCAAACTGAACAGCTGTGAACGTTACCCACGGGATCTGTATTTTGAGAAAGCTGTGAATGGTTTCCTTGCTGATCTCTTTACCAAATGGAAGGAGAAGAACTGTAGTCATGAAGTAACAGTGGTCCTATTTTCTAGGACTTTCTATGATGCAAAATCTCTTGATGAATTTCCTGAAATAAACCGAGCCTCAATTAGGCAGGATCACAAGGGGCGATTCTATGAAGACTTCTATAAGGTGGTGGTGCAGAATGAGAGGAGAGAAGAGTGGACCTCCCTCCTCGTGACCATTAAAAAGCTCTTCATCCAGTATCCAGTGCTGGTGCGACTGGAACAGGCAGAGGGCTTTCCTCAAGGAGACAATTCTACCTCAGCACAAGGAAACTACCTAGAGGCCATCAATCTGTCATTCAATGTGTTTGACAAGCACTACATCAACCGCAACTTTGACCGAACTGGGCAGATGTCTGTGGTGATCACGCCCGGGGTGGGTGTGTTCGAAGTGGACCGGCTACTCATGATCCTGACCAAGCAGCGGATGATAGATAACGGAATCGGTGTGGACTTGGTGTGCATGGGGGAGCAGCCACTGCATGCTGTCCCGTTGTTCAAGCTGCACAATCGGAGCGGCCCTCGYGACTCTCGCSTGGGTGACGACTACAATATCCCTCACTGGATAAACCACAGTTTCTACACATCCAAAAGCCAGCTCTTTTGTAATAGTTTCACCCCACGAATAAAACTGGCCGGAAAGAAGCCTGCCTCTGAGAAAGCAAAAAATGGCCGTGATACATCTCTGGGGACTCCCAAAGAATCTGAGAACACCCTTCCCATCCAAGTGGATTACGATGCTTACGACGCGCAAGTCTTCAGGCTGCCAGGCCCGTCCCGGGCTCAGCGCCTCGCCACCTGCAGATCCGTGCGAGAGCGGGAGAGTCACAGTCGGAAGAGCGCCAGCTCCTGYGATGTCTCATCCAGCCCTTCCCTGCCTGGCCAGGCGCTGCCCACAGAGGAGGTGAGGAGCCAGGCTTCTGACGACAGTTCCCTGGGCAGGAGCGCCAACATCCTGATGATCCCTCACCCCCACCTGCACCAGTATGAAGTCAGCAGCTCCTTGGGCTACACCAGCACTCGAGATGTCCTGGAGAACATGATGGAGCCACCACAGCGGGACTCCAGTGCGCCGGGGAGGTTCCACGTGGGCAGCGCAGAGTCCATGCTGCACTTTCGACCTGGGGGATACGTGCCCCAGCGGGCACTGATCAACCCCTTTGCACCCTCGCGGATGCCCATGAAGCTTACGTCCAACAGGAGGCGCTGGATGCACACTTTTCCTGTGGGACCATCTGGAGAGGCCATCCAGATCCATCACCAGACCCGACAGAACATGGCAGAGCTGCAGGGCAGTGGGCAGAGGGACTCGACCCACTCCTCTGCAGAGCTGCTGGAGTTGGCATACCATGAAGCCACTGGAAGGCACAGCACTTCCCACCAGCCTGGCGATGGCACGTCCTTCTTGCACTTCACTGGAACAGAAGAGCTTTCTGTCGGCCTGCTCAGCAGCAGTGGTGCAGGTAACCAACCCAAGAGAATGAGTCTCACTGACACAGATTCTTTTCATCTTTCCACAGGTATGAATCCTAGGACCCAGAATAAGGATTCTTTAGAGGACAGTGTTTCTACCTCTCCAGACCCAAGCCTTGTGTCCCGAAACCGCCCTGAGGAGGAAGACCAGTACTGGCTGAGCATGGGCAGAACTTTCCACAAAGTCACACTGAAGGATAAGATGATCACAGTGACACGATACCTTCCCAAGTACCCTTACGAATCTGCCCAGATCCACTACACCTACAGCCTCTGCCCCTCCCACTCAGACTCGGAGTTCGTCTCCTGTTGGGTGGAATTCTCGCACGAGCGGCTGGAGGAGTACAAGTGGAATTACTTAGACCAGTACATCTGCTCTGCCGGCTCCGAGGACTTCAGCTTAATCGAGTCTCTGAAGTTCTGGAGGACCCGCTTCCTGCTGCTGCCGGCCTGTGTCACCGCCACCAAGCGCATCACGGAGGGGGAGGCCCACTGTGACATCTACGGGGACAGGCCCCGGGCGGACGAGGAGGAATGGCAGCTCCTGGATGGCTTCATCCGATTCGTGGAGGGCCTAAACCGGATCCGCCGGCGGCACCGCTCCGATCGCATGATGCGGAAAGGGGCCGCCATGAAAGGCTTACAGATGGCTGGGCCCATCCCCACCCACTCCCTCGAGTCGACCGGCCCCCCGGTTGGGAAGAAGGGAACCTCAGCTCTGTCTGCACTGCTGGAAATGGAAGCCACTCAGAAGTGCCTGGGAGAACAGCAGGTGGCGGTGCATGGGGGCAAGAGCTCCGCCCCCCTGGCTGAGAGCAGCGGCGTAGCCATGACTCCCACCTACGTGGACAGCCCACGAAAGGTGTCTGTGGACCAGACGGCCACCCCGATGTCGGACAGCACCAGTCTGGGGGTGAGCACAGGCCAGTCCGTGGACAGAGGCAACAGCCAGACCYTTGGGAACTCGCAGAGCTCAGGGGAACAGGGCTTCCCCTCTGCAAACGCCAGTGACAGCAGCTCTCAGCAGCTGGCGGCCAGCTCCTTGACGTCCTCCTCCACCCTGGTGGAGATCCTGGAGGCCATGAAGCACCCCTCGACAGGAGTGCAGCTGCTCCCTGAGCAGAAGGGCCTCTCACCATGCTGCTTTATCAGTGCGGAGGTGGTACACTGGCTGGTGAACAACGTGGACGGGGTGCAGACGCAGGCCATGGCCATCGACATCATGCAGAAAATGCTGGAAGAGCAGCTCATCACACACGCCTCTGGCGAAGTCTGGCGGACCTTCATATACGGCTTCTATTTCTACAAGATAGTGATGGACAGAGAGCCTGAGCGAGTGGCCGTGCAGCAGCCCACTGCCTGGCACACGACAGCGGTGGACGACTTCGCCAGCTTCCAGCGCAAGTGGTTTGAGGTGGCCTTCGTGGCCGAGGAGCTCTTGCACTCGGAGATCCCTGCCTTCCTGTTGCCCTGGCTGCCCAGCCGGCCGGCCTCCTACGCCAGCAGGCACAGCTCCTTCAGCCGCAGCTTCGGGGGCCGGAGTCAGGCGGCTGCGCTTTTAGCTGCCACTGTCCCAGAGCAGAGGACCGTGACCCTGGACGTGGACGTGAACAACCGCACAGACCGACTGGAGTGGTGCAGCTGTTACTACCACGGCAACTTCTCACTGAACGCGGCCTTCGAGATCAAGCTGCACTGGATGGCGGTGACCGCCGCTGTGCTCTTTGAGATGGTCCAAGGTTGGCATCGCAAGGCCACCTCCTGTGGCTTTTTGTTGGTGCCGGTTTTGGAGGGTCCCTTTGCGCTGCCCAGTTACCTGTACGGCGACCCGCTCCGGGCCCAGCTCTTCATCCCGCTCAACATCAGCTGCCTGCTCAAGGAGGGCAGCGAGCACCTGTTTGACAGCTTTGAACCAGAAACATACTGGGACCGAATGCACCTTTTCCAGGAAGCCATCGCACACAGGTTTGGGTTTGTTCAAGATAAATATTCTGCCTCTGCTTTCAACTTCCCTGCTGAGACCAAGCCTCAGTACATCCACGTCACAGGCACGGTGTTCCTGCAGCTGCCCTACTCCAAGCGCAAGTTCTCGGGGCAGCCACGGCGGCGCCGCAACTCCACCAGCTCCACCAGCCAGAGCCTGTTCTGCGAGGAGAGGGTGGGCTACAGCTGGGCCTACAACACCATGCTGACCAAGACCTGGCGCTCCAGTGCCACCGGCGATGAGAGGTTTGCTGACCGGCTGCTGAAGGACTTCACGGACTTCTGCGTCAACCGTGACAACCGGCTGGTGACCTTCTGGACGAGCTGCCTGGAGAAGATGCACGCCAGCGCCCCGTGA

Related Sequences

bmy_01576T0 SequenceType object (3)

Length: 1512 aa      View alignments
>bmy_01576T0
MAKRRQDDFSPPSLEQLKETTVQDENNKGLQTCHPQEGLWGQWSVLIGLRRVVWLNCLSDDELVVNPKVFPYIKLGDIVEIAHPNDEYSPLLLQVKSLKEDLQKETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKSLVSTCAYITQKVEFAGIRAQAGELWVKNEKVMCGYISEDTRLEKSKLNSCERYPRDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYDAKSLDEFPEINRASIRQDHKGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPQGDNSTSAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDNGIGVDLVCMGEQPLHAVPLFKLHNRSGPRDSRXGDDYNIPHWINHSFYTSKSQLFCNSFTPRIKLAGKKPASEKAKNGRDTSLGTPKESENTLPIQVDYDAYDAQVFRLPGPSRAQRLATCRSVRERESHSRKSASSCDVSSSPSLPGQALPTEEVRSQASDDSSLGRSANILMIPHPHLHQYEVSSSLGYTSTRDVLENMMEPPQRDSSAPGRFHVGSAESMLHFRPGGYVPQRALINPFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSGQRDSTHSSAELLELAYHEATGRHSTSHQPGDGTSFLHFTGTEELSVGLLSSSGAGNQPKRMSLTDTDSFHLSTGMNPRTQNKDSLEDSVSTSPDPSLVSRNRPEEEDQYWLSMGRTFHKVTLKDKMITVTRYLPKYPYESAQIHYTYSLCPSHSDSEFVSCWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACVTATKRITEGEAHCDIYGDRPRADEEEWQLLDGFIRFVEGLNRIRRRHRSDRMMRKGAAMKGLQMAGPIPTHSLESTGPPVGKKGTSALSALLEMEATQKCLGEQQVAVHGGKSSAPLAESSGVAMTPTYVDSPRKVSVDQTATPMSDSTSLGVSTGQSVDRGNSQTXGNSQSSGEQGFPSANASDSSSQQLAASSLTSSSTLVEILEAMKHPSTGVQLLPEQKGLSPCCFISAEVVHWLVNNVDGVQTQAMAIDIMQKMLEEQLITHASGEVWRTFIYGFYFYKIVMDREPERVAVQQPTAWHTTAVDDFASFQRKWFEVAFVAEELLHSEIPAFLLPWLPSRPASYASRHSSFSRSFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLNAAFEIKLHWMAVTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQLFIPLNISCLLKEGSEHLFDSFEPETYWDRMHLFQEAIAHRFGFVQDKYSASAFNFPAETKPQYIHVTGTVFLQLPYSKRKFSGQPRRRRNSTSSTSQSLFCEERVGYSWAYNTMLTKTWRSSATGDERFADRLLKDFTDFCVNRDNRLVTFWTSCLEKMHASAP*