Part of scaffold_40 (Scaffold)

For more information consult the page for scaffold_40 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

OSM ENSTTRG00000001532 (Bottlenosed dolphin)

Gene Details

oncostatin M

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001445, Bottlenosed dolphin)

Protein Percentage 94.34%
cDNA percentage 95.28%
Ka/Ks Ratio 0.14439 (Ka = 0.0245, Ks = 0.1694)

BT.45038 ENSBTAG00000016163 (Cow)

Gene Details

oncostatin-M precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021515, Cow)

Protein Percentage 70.09%
cDNA percentage 79.6%
Ka/Ks Ratio 0.13754 (Ka = 0.1625, Ks = 1.1816)

OSM  (Minke Whale)

Gene Details

oncostatin M

External Links

Gene match (Identifier: BACU003335, Minke Whale)

Protein Percentage 95.52%
cDNA percentage 97.61%
Ka/Ks Ratio 0.38373 (Ka = 0.019, Ks = 0.0494)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 672 bp    Location:1394056..1395353   Strand:+
>bmy_01611
ATGGCAGCCACAAGCAAGTGCTTGGGCAAGTACCATGAACTCCTCCTGCAGCTCCAGCGTCAGGCGGACCTCATGCAGGACACCAGCACGCTCCTGGACCCCTATATCCGCATCCAAGGCCTGGACACGCCAGGACTGAAGGAGCACTGCAGGGAGTGTCCCGGGGCCTTCCCCAGTGAGGACGCCCTGCGGGGGCTCAGTAGACAGGGCTTCCTGCGGACCCTCAATGCCACGCTGGGCCTCGTCCTGCACAGACTGACCGCTTTGTATCAGGACCTTCCTGAAGCCCAGCAGTTGGTGGGACTGAACATCCGCGGGTTCAGGAGTAACATCCACTGCATGTCCCAGCTGCTGCGCAGCTCCTCGGAGGCGGAGACACCTGAGCCCACTCATCCGGGCCCCGGGCCCACGCTGCCGCCCACACCGCCCTCAGACGCCTTCCAGCACAAGTTGAAGAGCTGCAGGTTCCTGCGTGGCTACCACCGCTTCATGCACTCTGTGGGGCATGTCCTCCGGGAGTGGGGGGAGAGCCGGAGCCGGAGCCGGAGACACAGCCCCCGCCGGGCCCCTGGAGACACAGCCCCCGCCGGGCCCTGCAGAGGGGGGGCCCGCAGGACGTGGCCCTTCTGGAGGGACAGGAGACTCATGCCGAGGGGACAGCTGCCCCGGTAG

Related Sequences

bmy_01611T0 Protein

Length: 224 aa      View alignments
>bmy_01611T0
MAATSKCLGKYHELLLQLQRQADLMQDTSTLLDPYIRIQGLDTPGLKEHCRECPGAFPSEDALRGLSRQGFLRTLNATLGLVLHRLTALYQDLPEAQQLVGLNIRGFRSNIHCMSQLLRSSSEAETPEPTHPGPGPTLPPTPPSDAFQHKLKSCRFLRGYHRFMHSVGHVLREWGESRSRSRRHSPRRAPGDTAPAGPCRGGARRTWPFWRDRRLMPRGQLPR*