Part of scaffold_40 (Scaffold)

For more information consult the page for scaffold_40 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LIF ENSTTRG00000001531 (Bottlenosed dolphin)

Gene Details

leukemia inhibitory factor

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001444, Bottlenosed dolphin)

Protein Percentage 89.11%
cDNA percentage 90.26%
Ka/Ks Ratio 0.25495 (Ka = 0.0745, Ks = 0.2921)

LIF ENSBTAG00000007424 (Cow)

Gene Details

Leukemia inhibitory factor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009761, Cow)

Protein Percentage 82.67%
cDNA percentage 83.66%
Ka/Ks Ratio 0.12137 (Ka = 0.1085, Ks = 0.8939)

LIF  (Minke Whale)

Gene Details

leukemia inhibitory factor

External Links

Gene match (Identifier: BACU003336, Minke Whale)

Protein Percentage 88.12%
cDNA percentage 90.92%
Ka/Ks Ratio 0.41134 (Ka = 0.0807, Ks = 0.1963)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 681 bp    Location:1413339..1414667   Strand:+
>bmy_01612
ATGGCTCCCTCCTGCCTGTTCCCAGGAGTTGTGCCCCTGCTGCTGGTTCTGCACTGGAAACACGGAGCGGGGAGCCCTCTTCCCATCACCCCTGTCAATGCCACCTGTGCCACACGCCACCCATGTCACAGCAACCTCATGAACCAGATCAAGAACCAGCTGGCGCAGCTCAACAGCAGTGCCAAAGCCCTCTTTATTCTCTATGGTGCCCAGTTAGATAGGGGCAGAGCTGCCCGGAGAAGGGGGTGCCTGGCACTTCTAGCCTTGGGATTCCTCCACCTTGTGGAGGGAGAGGCTGATGAGAGACAGAGAAGGAGGCGCCCCAATGTGACCGACTTCCCACCCTTCCACGCCAATGGCACGGAGAGGGCCCGGCTGGTGGAGCTGTACCGCATCATCGCATACCTGGGCGCCTCCCTGGGCAACATCACGCGGGACCAGAAGGTCCTCAATCCCAGCGCCCACAGCCTGCACAGCAAGCTGAACGCCACGGCGGACGTCATGCGGGGCCTCCTCAGCAACGTGCTCTGCCGCCTGTGCAGCAAGTACCACGTGGCCCACGTGGATGTGGCCTACGGCCCGGACACCTCAGGCAAGGACGTCTTCCAGAAGAAGAAGCTCGGCTGTCAGCTCCTGGGGAAGTATAAGCAGGTCATCGCTGTGATGGCCCAGGCCTTCTAG

Related Sequences

bmy_01612T0 Protein

Length: 227 aa      View alignments
>bmy_01612T0
MAPSCLFPGVVPLLLVLHWKHGAGSPLPITPVNATCATRHPCHSNLMNQIKNQLAQLNSSAKALFILYGAQLDRGRAARRRGCLALLALGFLHLVEGEADERQRRRRPNVTDFPPFHANGTERARLVELYRIIAYLGASLGNITRDQKVLNPSAHSLHSKLNATADVMRGLLSNVLCRLCSKYHVAHVDVAYGPDTSGKDVFQKKKLGCQLLGKYKQVIAVMAQAF*