Sequence detailsbmy_01618 (Coding sequence)

Part of scaffold_40 (SequenceType object (1))

For more information consult the page for scaffold_40 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ZMAT5ENSTTRG00000000554 (Bottlenosed dolphin)

Gene Details

zinc finger, matrin-type 5

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000000519, Bottlenosed dolphin)

Protein Percentage 97.9%
cDNA percentage 99.07%
Ka/Ks Ratio 0.69186 (Ka = 0.0088, Ks = 0.0127)

ZMAT5ENSBTAG00000017890 (Cow)

Gene Details

Zinc finger matrin-type protein 5

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000023779, Cow)

Protein Percentage 95.8%
cDNA percentage 93.01%
Ka/Ks Ratio 0.0517 (Ka = 0.0203, Ks = 0.3925)

ZMAT5 (Minke Whale)

Gene Details

zinc finger, matrin-type 5

External Links

Gene match (Identifier: BACU003341, Minke Whale)

Protein Percentage 99.3%
cDNA percentage 99.07%
Ka/Ks Ratio 0.07884 (Ka = 0.0029, Ks = 0.0373)

Additional orthologs identified in other species via the OPTIC pipeline.

ZMAT5 (Human)   Zmat5 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 432 bp    Location:1817819..1832468   Strand:+
Raw sequence 
>bmy_01618
ATGGGGAAGCGTTACTTCTGCGACTACTGCGACCGCTCCTTCCAGGACAACCTCCACAACCGCAAGAAGCACCTGAACGGGCTGCAGCACCTCAAGGCCAAGAAGCTCTGGTACGACATGTTCCGAGATGCAGCTGCCATCTTGCTGGATGAACAGAACAAGCGGCCCTGCAGGAAGTTTCTACTGACAGAGGAGAGGCGGGCCAGGGAGTGGCCACTAGACGTCACCGAGCTCCCTGAGGTCCACGTGGACGACTGGCTGGAGAAGAGAGCCCAGCGGCTGAGCTCGGCCCCAAGCAGCAGGGCTGAACCCATCAGAGCCACCGTCTTCCAGTACCCGGTGGGCTGGCCACCAGTCCAGGAGCTTCCTCCATCCCTGCGGGCACCCCCGCCTGGGGGCTGGCCCCTGCAGCCCAGCGTCCAGTGGGGCTGA

Related Sequences

bmy_01618T0 SequenceType object (3)

Length: 144 aa      View alignments
>bmy_01618T0
MGKRYFCDYCDRSFQDNLHNRKKHLNGLQHLKAKKLWYDMFRDAAAILLDEQNKRPCRKFLLTEERRAREWPLDVTELPEVHVDDWLEKRAQRLSSAPSSRAEPIRATVFQYPVGWPPVQELPPSLRAPPPGGWPLQPSVQWG*