Part of scaffold_40 (Scaffold)

For more information consult the page for scaffold_40 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NIPSNAP1 ENSTTRG00000000548 (Bottlenosed dolphin)

Gene Details

nipsnap homolog 1 (C. elegans)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000514, Bottlenosed dolphin)

Protein Percentage 99.52%
cDNA percentage 98.72%
Ka/Ks Ratio 0.03814 (Ka = 0.0021, Ks = 0.0542)

BT.103053 ENSBTAG00000013152 (Cow)

Gene Details

protein NipSnap homolog 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029502, Cow)

Protein Percentage 98.09%
cDNA percentage 95.69%
Ka/Ks Ratio 0.04179 (Ka = 0.0098, Ks = 0.2345)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 630 bp    Location:1951664..1968384   Strand:+
>bmy_01621
ATGGCTCCGCGTCTGTGCAGCATCTCTGCGGCGGCTCGGCGGCTGCTGGGGCGCCCGGGGCCCGGGGGCCGGGACGTTGCGGCTGTGGCTGCAGCGCGCTTCTATTCCAAGGACAATGAAGGCAGCTGGTTCCGTTCTCTGTTCGTACACAAGGTGGATCCCCGGAAGGACGCCCACTCCACCCTGCTGTCCAAGAAGGAGACCAGCAACCTCTACAAGATCCAGTTTCACAATGTGAAGCCCGAGTGTCTGGATGCCTACAACAGCCTGACGGAGGCTGTGCTGCCCAAGCTGCACCTGGATGAGGACTATCCCTGCTCGCTCGTGGGCAACTGGAACACATGGTACGGGGAGCAGGACCAGGCAGTGCACCTGTGGCGATTCTCAGGTGGCTACCCAGCCCTCATGGACTGCATGAACAAGCTCAAAAACAACAAGCCAGGAACCATGATCGAGTGGGGGAACAACTGGGCTCGGGCCATCAAGTACCGGCAGGAGAACCAGGAGGCAGTGGGCGGCTTCTTCTCGCAGATAGGAGAGCTCTACGTTGTGCACCATCTCTGGGTCCCCCTGGTTCGACACATGGAGTCTCGGATCATGATCCCTTTGAAGATCTCACCTCTCCAGTGA

Related Sequences

bmy_01621T0 Protein

Length: 210 aa      View alignments
>bmy_01621T0
MAPRLCSISAAARRLLGRPGPGGRDVAAVAAARFYSKDNEGSWFRSLFVHKVDPRKDAHSTLLSKKETSNLYKIQFHNVKPECLDAYNSLTEAVLPKLHLDEDYPCSLVGNWNTWYGEQDQAVHLWRFSGGYPALMDCMNKLKNNKPGTMIEWGNNWARAIKYRQENQEAVGGFFSQIGELYVVHHLWVPLVRHMESRIMIPLKISPLQ*