Sequence detailsbmy_01624 (Coding sequence)

Part of scaffold_40 (SequenceType object (1))

For more information consult the page for scaffold_40 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

AP1B1ENSTTRG00000011891 (Bottlenosed dolphin)

Gene Details

adaptor-related protein complex 1, beta 1 subunit

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011284, Bottlenosed dolphin)

Protein Percentage 91.88%
cDNA percentage 91.72%
Ka/Ks Ratio 0.16812 (Ka = 0.0235, Ks = 0.1398)

BT.35586ENSBTAG00000001189 (Cow)

Gene Details

AP-1 complex subunit beta-1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000001576, Cow)

Protein Percentage 95.66%
cDNA percentage 92.38%
Ka/Ks Ratio 0.04753 (Ka = 0.0237, Ks = 0.4981)

AP1B1 (Minke Whale)

Gene Details

adaptor-related protein complex 1, beta 1 subunit

External Links

Gene match (Identifier: BACU003348, Minke Whale)

Protein Percentage 98.86%
cDNA percentage 98.67%
Ka/Ks Ratio 0.09517 (Ka = 0.0052, Ks = 0.0548)

Additional orthologs identified in other species via the OPTIC pipeline.

AP1B1 (Human)   Ap1b1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2628 bp    Location:2088610..2118175   Strand:+
Raw sequence 
>bmy_01624
ATGCTGCCTCCTTTTTTAGGGGAGATCTTCGAGCTGAAGGCAGAGCTGAACAGTGACAAGAAGGAGAAGAAGAAGGAGGCGGTGAAGAAAGTGATTGCGTCTATGACCGTGGGCAAAGACGTCAGTGCCCTCTTCCCCGACGTGGTGAACTGTATGCAGACGGACAACCTGGAACTGAAGAAGCTGGTGTACCTGTACTTGATGAACTATGCCAAGAGTCAGCCTGACATGGCCATCATGGCCGTCAACACCTTTGTGAAGGACTGTGAGGACCCCAACCCCCTGATCCGGGCCCTGGCTGTGCGGACCATGGGCTGCATCCGCGTTGACAAGATCACAGAGTACCTGTGCGAGCCACTCCGGAAGTGCCTGAAGGACGAGGACCCATATGTGCGCAAGACGGCGGCCGTGTGCGTGGCCAAGCTCCACGACATCAATGCCCAGCTGGTAGAGGACCAGGGCTTCCTGGATACCCTTAAAGACCTCATCTCTGACTCTAACCCCATGGTGGTGGCAAACGCAGTGGCTGCCCTCTCGGAGATCGCCGAGTCTCACCCCAGCAGCAACCTGCTTGACCTGAACCCGCAGTCCATTAACAAGCTGCTGACGGCCCTGAACGAGTGCACCGAGTGGGGCCAGATCTTCATCCTGGACTGCCTGGCCAACTACACACCCAAGGACGACCGGGAGGCCCAGAGGGCCTATGACTTGCTCTTTGCTCTTCGGGCAACCTTGCCCACCACCAGGCCTGAGATCCTGAAGCACGAGATGAAGGTGTTCTTTGTGAAGTACAATGACCCCATCTACGTGAAGCTGGAGAAGCTGGACATCATGATCCGCCTGGCCTCCCAGGCCAACATCGCCCAGGTGTTGGCGGAGCTGAAAGAGTACGCGACAGAGGTGGATGTGGACTTTGTACGGAAGGCTGTGCGAGCCATTGGCCGTTGCGCCATCAAGGTGGAGCAATCTGCCGAGCGCTGCGTGAGCACGCTGCTCGATCTCATCCAGACCAAGGTCAACTACGTGGTCCAGGAAGCCATCGTGGTCATCAAGGACATCTTCCGCAAGTACCCCAACAAGTATGAGAGTGTGATCGCCACGCTGTGCGAGAACCTGGACTCTCTGGACGAGCCTGAGGCCCGGGCCGCCATGATCTGGATTGTGGGCGAGTACGCCGAGCGGATAGACAACGCGGATGAGCTGCTGGAGAGCTTCCTAGAGGGCTTCCATGACGAGAGCACCCAGGTCCAGCTGCAGCTGCTGACAGCCATCGTGAAACTCTTTCTGAAGAAGCCGACAGAGACCCAGGAGCTGGTGCAGCAGGTCCTCAGCTTGGCCACTCAGGACTCAGACAACCCGGACTTGCGAGACCGCGGCTACATCTACTGGCGCCTGCTCTCCACGGACCCCGTGGCTGCCAAGGAGGTGGTGCTGGCGGAGAAGCCGCTCATCTCAGAGGAGACAGACCTCATCGAGCCCACGCTGCTGGACGAGCTCATCTGCTACATCGGCACCCTGGCCTCCGTCTACCACAAGCCGCCCAGCGCCTTTGTGGAGGGGGGCCGGGGCGTCGTGCACAAGAGCCTGCCGCCCCGCACGGCCTCGAGTGAGAGCACGGAGAGCCCGGAGACGGCCCCTGCCGGAGTGCCCCCTGGCGAGCAGCTGGATGTCATCCCCACCCAGGGCGACCTGCTGGGCGACCTCCTCAACCTGGACCTTGGCCCTCCGGTCAGTGGCCCACCCCTGGCCACCTCCTCGGTGCAGATGGGAGCTGTGGACCTTCTTGGCAGCGGCCTCGACAGCCTGATCGGGGCCCCCAACTTCGTGTCACCCCCAGCAGCAGCAGTACCAGCCAACCTAGGAGCACCCATGGGCAGTGGCCTGAGTGACCTCTTTGACCTGACCAGTGGCGTGGGCACCTTATCAGGATCATATGTGGCTCCCAAAGCAGTCTGGCTCCCGGCTATGAAGGCCAAAGGATTGGAGATCTCAGGCACCTTCACCCGCCAGGTGGGCTCCATCTCCATGGACCTGCAGCTGACCAACAAGGCCTTGCAGGTCATGACCGACTTTGCCATCCAGTTCAACCGCAACAGCTTTGGCCTGGCCCCCGCCGCCCCCCTCCAGGTCCATGCGCCGCTCAGCCCCAACCAGACTGTGGAGATCTCCCTGCCTCTCAACACAGTGGGCTCAGTCATGAAGATGGAACCTCTGAACAACCTCCAGGTGGCCGTAAAGAACAACATCGACGTCTTCTACTTCAGCACCTTGTACCCGCTGCACATCCTGTTTGTGGAGGATGGGAAGATGGACCGGCAGATGTTCCTGGCCACATGGAAAGACATTCCCAATGAGAACGAAGCCCAGTTCCAGATCAGAGACTGCCCCCTGAATGCGGAGGCCGTGAGCAGTAGGCTGCAGAGCAGCAACATCTTCACCGTTGCCAAGAGGAACGTGGAGGGCCAGGACATGCTTTACCAGTCCCTCAAGCTGACCAATGGCATCTGGGTGCTGGCGGAGCTGCGCATCCAGCCCGGCAACCCCAGCTTCATGCTGTCCCTGAAGTGCCGAGCACCGGAGGTGTCCCAGCACGTGTACCAGGCCTACGAGACCATCCTCAAGAACTGA

Related Sequences

bmy_01624T0 SequenceType object (3)

Length: 876 aa      View alignments
>bmy_01624T0
MLPPFLGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQIFILDCLANYTPKDDREAQRAYDLLFALRATLPTTRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPPSAFVEGGRGVVHKSLPPRTASSESTESPETAPAGVPPGEQLDVIPTQGDLLGDLLNLDLGPPVSGPPLATSSVQMGAVDLLGSGLDSLIGAPNFVSPPAAAVPANLGAPMGSGLSDLFDLTSGVGTLSGSYVAPKAVWLPAMKAKGLEISGTFTRQVGSISMDLQLTNKALQVMTDFAIQFNRNSFGLAPAAPLQVHAPLSPNQTVEISLPLNTVGSVMKMEPLNNLQVAVKNNIDVFYFSTLYPLHILFVEDGKMDRQMFLATWKDIPNENEAQFQIRDCPLNAEAVSSRLQSSNIFTVAKRNVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSFMLSLKCRAPEVSQHVYQAYETILKN*