Part of scaffold_40 (Scaffold)

For more information consult the page for scaffold_40 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RHBDD3 ENSTTRG00000011879 (Bottlenosed dolphin)

Gene Details

rhomboid domain containing 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011266, Bottlenosed dolphin)

Protein Percentage 93.04%
cDNA percentage 94.78%
Ka/Ks Ratio 0.4107 (Ka = 0.0329, Ks = 0.0802)

RHBDD3 ENSBTAG00000017750 (Cow)

Gene Details

rhomboid domain-containing protein 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023599, Cow)

Protein Percentage 90.17%
cDNA percentage 90.46%
Ka/Ks Ratio 0.22678 (Ka = 0.0573, Ks = 0.2527)

RHBDD3  (Minke Whale)

Gene Details

rhomboid domain containing 3

External Links

Gene match (Identifier: BACU003352, Minke Whale)

Protein Percentage 97.85%
cDNA percentage 98.15%
Ka/Ks Ratio 0.41005 (Ka = 0.0135, Ks = 0.0329)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1503 bp    Location:2169996..2175280   Strand:+
>bmy_01628
ATGGGCTCGGGGCGCTCGGGTGTCGGCGGGAGGCTAGAGTACCGACTCCCAGCCAAGGGCTCCACTCGGCCTTCTGGGGTGGGGGGTGCGCTGCGCCGTGAGTACCCCAGACACGTGGCCCGGTCCGCGGGGGAGGGGGCCAAGGCCGGGCCCCCGTTCAACTTCCCATTCCCCGTGCTTCCCACTCCAGGCTCCTTTCCAGGGCCCATCAGGGCTCAGGGACCTTTTGGCCTGGCCTCTTCCCATCCTCACACATCACACACAGCCCCAAGACCACCTTTGATCACCTTCAGACAAGCTATGCATGCCAGAGGTCCCCCTGGCCTACTGACCCCGGCGCTGCCTCTCGCCTCCTCCGTCCTGATGCTGCTCATGAGCGGCCTGTGGCTGCTGGGAGCCGGCCCCAGCCTTGTCCTGGCCCCAGAGCTGCTGCTGGACCCTTGGCAGGTGATTAAACTACTGGCAGTGGGCAGACTTTGGCTCCCAGGGAGGGGAGGCTGGCTTAGTGGGTGGCCCTGGTGGAGGGTGTTTCCCCATCTGGCACACCTGGGCCAGCCTTGGGGGTTAGGGGCACTAACCTGGCACATAAGCCCGTTCTCTCTCCCAGCGCACCGGCTGCTGACACATGCCCTGGGCCACAAGGCCCTCCCAGGGCTGCTGCTGAGCCTGCTGCTCCTGCCCACGCTGGGCTGGCGGCAGGAGTGCCACCTGGGCACACTGCGGTTCCTGCATGCCTCCACCCTCCTCGCCCTGGCCTCCGGGCTGATGGCTGTGCTGCTGGCAGGCCTCGGGGTGTCCAGTGCAGCCGGGGGCTGTGGATACATGCCTGTCCACCTGGCCATGCTGGCGGGGCAGGGTTACCACCCTAGACGGCCCCGTGGGGCACTGCCACCATGGCTCCTGCCGTGGCTGCTGCTCGCCCTGACACCACTGCTCAGCTCCGAGCCGCCCTTCCTGCAGCTCTTCTGCGGCCTCCTGGCTGGCCTGGCCTGCAGCCAGGCTGAGCTGCCTGTTACCCATCCTGCCGGAGTGAGGCCACCCACCCCTGGACCTCCTTACATGGCCTCCCCTAGCCTCTGGCCCCTCAGCGAAGGCTCAGCCCCGCTCCCGCCAGGCGTGGGGCCTGTGCAGCCGCTCTGGGAGGGCTCCTCAGAGGTGGGACTGGCCTGGTCTGGGCCCAGCTTCCCCCCGGGGACCCCGCTGTGGGCAGCCCTGGACGAGCAGATACTGCAGAAGGGGATCCAGGCCTCGCTCCTTGAGGGGCCAGTCCAGGGTCCCGAGAGCCCACTCCGGCTGCCTAAGTCCTCTGTCTCCTCCCTGCGGCTGCAGCAACTGGAGCGCATGGGCTTCCCCACGGAGCAGGCGGTGGTGGCCCTGGCAGCCACGGGCCGTGTGGAGGGTGCCGTGTCACTGCTGGTTGGTGGGGAGGTGGGCACCGAGGCACTGGTGACTCAGGGGAGGGGTGACAGGGTGACCCACCCTGAGGGTCCTGGGCCCCCCTAG

Related Sequences

bmy_01628T0 Protein

Length: 501 aa      View alignments
>bmy_01628T0
MGSGRSGVGGRLEYRLPAKGSTRPSGVGGALRREYPRHVARSAGEGAKAGPPFNFPFPVLPTPGSFPGPIRAQGPFGLASSHPHTSHTAPRPPLITFRQAMHARGPPGLLTPALPLASSVLMLLMSGLWLLGAGPSLVLAPELLLDPWQVIKLLAVGRLWLPGRGGWLSGWPWWRVFPHLAHLGQPWGLGALTWHISPFSLPAHRLLTHALGHKALPGLLLSLLLLPTLGWRQECHLGTLRFLHASTLLALASGLMAVLLAGLGVSSAAGGCGYMPVHLAMLAGQGYHPRRPRGALPPWLLPWLLLALTPLLSSEPPFLQLFCGLLAGLACSQAELPVTHPAGVRPPTPGPPYMASPSLWPLSEGSAPLPPGVGPVQPLWEGSSEVGLAWSGPSFPPGTPLWAALDEQILQKGIQASLLEGPVQGPESPLRLPKSSVSSLRLQQLERMGFPTEQAVVALAATGRVEGAVSLLVGGEVGTEALVTQGRGDRVTHPEGPGPP*