Sequence detailsbmy_01636 (Coding sequence)

Part of scaffold_40 (SequenceType object (1))

For more information consult the page for scaffold_40 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

XBP1ENSBTAG00000005970 (Cow)

Gene Details

X-box-binding protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000007835, Cow)

Protein Percentage 71.57%
cDNA percentage 74.62%
Ka/Ks Ratio 0.51566 (Ka = 0.2633, Ks = 0.5107)

Additional orthologs identified in other species via the OPTIC pipeline.

XBP1 (Human)   Xbp1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 984 bp    Location:2544020..2548890   Strand:+
Raw sequence 
>bmy_01636
ATGACTCAGTGTGGTATGTCTCTTTCTGTTCTCAGGAAACTGAAAAACAGAGTAGCAGCTCAGACTGCCAGAGACCGAAAGAAAGCTCGAATGAGTGAGCTGGAGCAACAAGTGGTAGATTTGGAAGAAGAGAACCAAAAACTTTTGCTAGAAAATCAGCTTTTACGAGAGAAAACTCATGGCCTCGTAGTTGAGAACCAGGAATTGAGACAGCGCTTGGGGATGGATGCCCTAGTGACTGAAGAGGAGGCAGAGACCAAAGGGAATGGAGCGAGGCCGGTGGCCGGGTCTGCTGAGTCCGCAGCACTCAGACTACGTGCRCCTCTGCAGCAGGTGCAGGCCCAGTTGTCACCCCTCCAGAACATCTCCCCATGGATTCTGACGGTGTTGACTCTTCAGACTCTGAGACAGATGAGGGCAGAGAAGTCTGATATCCTGTTGGGCATTTTGTTCAACTTGGACCCAGTTATGTTCTTCAGATGTCCTTCCCCAGAGTCTACCAGCCTGGAGCAGCTCCCAGAAGTCGACCCAGAAGGACCCAGTTCCTTACCCACACCCCCCTCTCCATCCCTGGGGACGTCATCAGCCAAGCTGGAAGCCATTAATGAACTGATTCGTTTTGACCACGTATATACAAAGCCCCTAGTCTTAGAGATACCCTCTGAGACAGAGAGCCAAGCTAATGTGGTAGTGAAAATTGAGGAAGCACCTTCCAGTCCCTCAGAGAAGGATCACCCTGAATTCACTGTCTCAGTGAAGGAAGAACTTGTAGACGATGACTTCATTCCAGAGCTGGGTATCTCAGATCTGCTTTCAACCAGCCACTGCCTGAAGCCATCTTCCTGCCTACTGGATGCTTATAGTGACTGTAGCTATGAGGGTTCCCCTTCTCCCTTGAGTGACATGTCCTCTCTGCTTGGTGTAGACCATTCTTGGGAGGACACTTTTGCCAGTGAACTCTTTCCCCAGCTGATTAGTGTCTAA

Related Sequences

bmy_01636T0 SequenceType object (3)

Length: 328 aa      View alignments
>bmy_01636T0
MTQCGMSLSVLRKLKNRVAAQTARDRKKARMSELEQQVVDLEEENQKLLLENQLLREKTHGLVVENQELRQRLGMDALVTEEEAETKGNGARPVAGSAESAALRLRAPLQQVQAQLSPLQNISPWILTVLTLQTLRQMRAEKSDILLGILFNLDPVMFFRCPSPESTSLEQLPEVDPEGPSSLPTPPSPSLGTSSAKLEAINELIRFDHVYTKPLVLEIPSETESQANVVVKIEEAPSSPSEKDHPEFTVSVKEELVDDDFIPELGISDLLSTSHCLKPSSCLLDAYSDCSYEGSPSPLSDMSSLLGVDHSWEDTFASELFPQLISV*