Part of scaffold_40 (Scaffold)

For more information consult the page for scaffold_40 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HSCB ENSTTRG00000011841 (Bottlenosed dolphin)

Gene Details

HscB iron-sulfur cluster co-chaperone homolog (E. coli)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011223, Bottlenosed dolphin)

Protein Percentage 92.76%
cDNA percentage 94.12%
Ka/Ks Ratio 0.44322 (Ka = 0.0475, Ks = 0.1072)

BT.67787 ENSBTAG00000015075 (Cow)

Gene Details

iron-sulfur cluster co-chaperone protein HscB, mitochondrial

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000041625, Cow)

Protein Percentage 84.16%
cDNA percentage 88.39%
Ka/Ks Ratio 0.42231 (Ka = 0.0961, Ks = 0.2275)

HSCB  (Minke Whale)

Gene Details

HscB mitochondrial iron-sulfur cluster co-chaperone

External Links

Gene match (Identifier: BACU003362, Minke Whale)

Protein Percentage 92.31%
cDNA percentage 94.72%
Ka/Ks Ratio 0.68389 (Ka = 0.0498, Ks = 0.0728)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 666 bp    Location:2600293..2582706   Strand:-
>bmy_01638
ATGTGGTGCGGAAGGACCAGGGCCTTGCTCCGGATGTCGGGGTTATGGCCGACAGGGGTGCTCGGGAGGAGACCGCTAAACTGCAGTGCTGCGTCACTGGCGGGAAGCAACTCCCCCCGGTGTTGGAACTGCGGCGGCCTAGGGGGCCCCTTGCGAGGGGACCGGTTCTTCTGCCCTCAGTGCCGCGCGCTGCAGCCACCTGACCCCACGCGAGACTACTTCAGTCTCATGGACTGCAACCGCTCCTTCAGAGTTGACACTGCGAAGCTCCAGTGTAGGTACCAGCAACTACAGCGTCTTATCCACCCAGATTTCTTCAGCCAGAGGTCTCAGACTGAAAAGGATTTCTCAGAGAAGCATTCGACCCTTGTTAATGATGCCTATGAGACCCTTCTGGCTCCCCTGAGCAGGGGAATATACCTTCTAAAGCTCTGTGGAGTAGAGATTCCCGAAGGGACAGATTATGAAATGGACAGTCAATTCCTCATGGAAATAATGGAAATCAATGAAAAACTTGCAGAAGCTCAAGGTGAAACTGCCATGAAAGAGATGGAATCTATTGTCAGAGCTAAACAGAAAGAATTGACTGACAATGTGAGCAGAGCTTTTGAAAGAGTCTCTGGATCAAGGGAGATTAAAATAGAAAATTCGGATGAAAAATTCTGA

Related Sequences

bmy_01638T0 Protein

Length: 222 aa      View alignments
>bmy_01638T0
MWCGRTRALLRMSGLWPTGVLGRRPLNCSAASLAGSNSPRCWNCGGLGGPLRGDRFFCPQCRALQPPDPTRDYFSLMDCNRSFRVDTAKLQCRYQQLQRLIHPDFFSQRSQTEKDFSEKHSTLVNDAYETLLAPLSRGIYLLKLCGVEIPEGTDYEMDSQFLMEIMEINEKLAEAQGETAMKEMESIVRAKQKELTDNVSRAFERVSGSREIKIENSDEKF*