Sequence details bmy_01644 (Coding sequence)

Part of scaffold_41 (Scaffold)

For more information consult the page for scaffold_41 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMEM200C ENSBTAG00000046396 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000054997, Cow)

Protein Percentage 79.28%
cDNA percentage 84.9%
Ka/Ks Ratio 0.20695 (Ka = 0.1155, Ks = 0.558)

TMEM200C  (Minke Whale)

Gene Details

transmembrane protein 200C

External Links

Gene match (Identifier: BACU017040, Minke Whale)

Protein Percentage 97.05%
cDNA percentage 97.81%
Ka/Ks Ratio 0.22342 (Ka = 0.0143, Ks = 0.0639)

Additional orthologs identified in other species via the OPTIC pipeline.

TMEM200C (Human)  

Genome Location

Sequence Coding sequence

Length: 1221 bp    Location:636403..634634   Strand:-
Raw sequence 
>bmy_01644
ATGATCGCCACCGGCGGCCTGCTGAGGATTTCCGCCAGAAAGCAGGATCCCCTCCACCCCCCGAGCCAGGTTCCCAAGCGCAAGCGGAAAGCCAGGAAGAGGCGCAAGAACGACGTGGTGGTGGTGAAAGGCAAGCTGAAGCTGTGCTCCGTCTCCGGGCTCATTGCCCTCTGCGGGATCCTGGTGCTGCTGGTGGGCATAGCCTTGGCGGTGGTGGGCTACTGGCCCAAGGCCAACGGGACCAATAGGGAGGGGGGTAAGCAGCTGCCGCCCGCGGGCAGCGGCCACCGCGTCCCCACCATGACCAACAGCAGCAGTAGTGGCAGCAGAAACCGGTCCAGGAAGCACCCGGGGCCTCCGGCGGGTGTCACCGCCAGTTCCGTGGGCGCGCCCAGGAGCACGCCTCCAGCACGGTCCCCCGCGCCCTCTTCGTCCTCCTCTACGTCCGTGGGCTTCTTCTTCCGCATCTTCTCCGGCTACCTGCACTCGGACAAGCTCAAGGTCTTTGGGCCCCTCATCATGGGCATCGGCATCTTCCTCTTCATCTGCGCCAACGCAGTGCTCCATGAGAACCGGGACAAGAAGACCAAGATCATCAACCTGCGGGACCTCTACTCCACTGTCATCGACGTGCACAGCCTCCGCGCCAAAGACCTGGCGGCCGCCGCGGCTACTGCCGCCGCCGCCGCCGCCGCCTCCTCGTCCTCCGCCCCCGCCTCGGCGCCCCCAGGGGCCGCGCCGCTCAACGGCTTCCTCAGCTACGTGCACACCAGCGGGCTCCCGGACTACCGGGCGCCCTCGTCCCCCGAGCCCTCGCCCGCCTCGCGCAGCGCGGACCTGGACTCGAGCGTCCCGGCCCCAGCTGCCTCCCCCGAGCCCCCGCTTCGGCGGGAGCGCTCGCCCCCCGCCGGGCCGGACTCGCCGAGCTCCCAGTCGGATGACCCGTCCTGTAGCAATAAGGGCTACACCCCCCTGCGGGAGGCCGGCACCTCCCTGGAGTCGGTGGTGGACCCGGTGGCTGGTGAAAGTCCAGACGGTGAGGCCGCCACCTCCCCGGGGGCGGAGCAGAGCCCCCCGGAGGGTCCCGGCCAGGAGCCCATAGCGGGCGAGCCCCCGCAGCGGGTGCAGAGGCAGTTTACAAACGAGGAGAAACTCTTCATGATTTCCCGATCTCATGCCCCAGGGGTCGAGGACGGAGAACTGGAAACTACTGTAATTTAG

Related Sequences

bmy_01644T0 Protein

Length: 407 aa      View alignments
>bmy_01644T0
MIATGGLLRISARKQDPLHPPSQVPKRKRKARKRRKNDVVVVKGKLKLCSVSGLIALCGILVLLVGIALAVVGYWPKANGTNREGGKQLPPAGSGHRVPTMTNSSSSGSRNRSRKHPGPPAGVTASSVGAPRSTPPARSPAPSSSSSTSVGFFFRIFSGYLHSDKLKVFGPLIMGIGIFLFICANAVLHENRDKKTKIINLRDLYSTVIDVHSLRAKDLAAAAATAAAAAAASSSSAPASAPPGAAPLNGFLSYVHTSGLPDYRAPSSPEPSPASRSADLDSSVPAPAASPEPPLRRERSPPAGPDSPSSQSDDPSCSNKGYTPLREAGTSLESVVDPVAGESPDGEAATSPGAEQSPPEGPGQEPIAGEPPQRVQRQFTNEEKLFMISRSHAPGVEDGELETTVI*