Sequence detailsbmy_01656 (Coding sequence)

Part of scaffold_41 (SequenceType object (1))

For more information consult the page for scaffold_41 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CSRNP1ENSTTRG00000006107 (Bottlenosed dolphin)

Gene Details

cysteine-serine-rich nuclear protein 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005777, Bottlenosed dolphin)

Protein Percentage 63.04%
cDNA percentage 62.86%
Ka/Ks Ratio 0.08549 (Ka = 0.0048, Ks = 0.056)

BT.102977ENSBTAG00000003845 (Cow)

Gene Details

cysteine/serine-rich nuclear protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000005016, Cow)

Protein Percentage 91.27%
cDNA percentage 91.33%
Ka/Ks Ratio 0.13013 (Ka = 0.0419, Ks = 0.3218)

CSRNP1 (Minke Whale)

Gene Details

cysteine-serine-rich nuclear protein 1

External Links

Gene match (Identifier: BACU014613, Minke Whale)

Protein Percentage 99.11%
cDNA percentage 98.81%
Ka/Ks Ratio 0.08694 (Ka = 0.0038, Ks = 0.0438)

Additional orthologs identified in other species via the OPTIC pipeline.

CSRNP1 (Human)   Csrnp1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1884 bp    Location:2585351..2573255   Strand:-
Raw sequence 
>bmy_01656
CCGCTGCCGGACGCGCAGAGCGAGGGGCTGCTGGGCCGACGGCTGCCCGCCGAGCTAGCGAGCGAGCGAGCGAGCGAGCGCGGGGTCGCAGCGCAGGGGGCGTTCCCGGCCAGGACGCGGGTCGCGGCGTTGCCCTTGGCGAGCGTCCGGATCGCAGGCTGTCTGTGCCCAGACCCCAGAGTACCCCTCACCACCATGACTGGGCTGCTGAAGAGGAAGTTTGACCAGCTGGATGAGGACTCCTCCTCACTCTGCTCGTCCTCCTCCTCTTTGTCCTCCTCGGGCCGCCACTCTCCCTCCTGCTCCCCGAGCTCTTCGGCCTCCCCATCGTGGGACTCGGATGAGGAGGGCCCCTGGGATCAGATGCCCTTGCCTGACCGCGACTTCTGTGGCCCCCGAAGTTTCACCCCCCTGTCCATCCTGAAGCGGGCCCCCCGGAAGCGCCCAGGCCGGGTAGCCTTCGATGGCATCACTGTCTTCTACTTCCCTCGGTGCCAGGGCTTCACCAGTGTGCCCAGCCGCGGCGGCTGCACCCTGGGTATGGCCTCCCGCCACAGTGCCTACCGCCGCTTCTCCCTGGCCGAGTTTACGCAGGAGCAAGCCCGGGCACGGCAAGAGAAGCTGCGCCTACGCTTGAAGGAGGAGAAGCTGGAGGCGCTGAGATGGAAGGATTTGGCAGTGGCCGTGGCAGGTGGCCAGTTGGAGGAAATGACCTTCCTCCAGCCCTACCCAGCCCGGAAGCGGCGGGCTCTGCTGCGGGCCTCGGGCGTGCGGAGGATCGATCGCGAGGAGAAGCGAGAGCTGCAGGCCCTGCGCCAGTCCCGGGAGGACTGTGGCTGTCGCTGTGACAGGGTCTGTGACCCTGAGACCTGCAGCTGTAGCCTGGCGGGCATTAAGTGCCAGATGGACCACACAGCGTTCCCCTGTGGCTGCTGCAGAGAGGGCTGTGAGAACCCTAAGGGCCGTGTGGAATTTAATCAGGCGCGAGTTCAGACCCATTTCATCCACACGCTCACCCGCCTGCAGCTGGAGCAGGGGGCGGAGAGCCTTGGGGAGCTGGAGGCCCCGGCCCAGGGTGCCACATTCAGCCCCAACGAGCAGGTCCTGGCCCCCACGTTCCCTCTGGCCAAGCCCCCCGTGAGCAGCGAGCTGGGAGACAACAGCTGCAGCAGCGACATGACCGATTCGTCCACAGCATCGAGCAGCAGCGAGGCCCCCAGTGGCTCTGCCCACCCGGCCCTGCCCGGCCCTGGCTTCCAGCCTGGAGTGGACGATGACAGCCTGGCTCGAATCCTGAGCTTCAGTGACTCTGACCTGGGCGGAGATGGGGAGGAGGAGGAGGAAGGGGGTGTGGGCAGCCTGGACAACCTCAGCTGCTTCCACCCAGCTGACATCTTTGGTACCGGTGACCCCGCTGGCCTGGCCAGCTGGACCCACAGCTATTCCAGCTCCAGCCTCGCGTCAGGCATCCTGGATGAAAACGCCAACCTGGATGCCAGCTGCTTCCTCAATAGTGGCCTTGAAAGCTTGGGGGAAGGCAGCCTCCCCGGCCACCCGGTGCCAGCCATCACGGATGCCAGCCAGAGCAGCTCAGTGGACCTGAGCTTGTCCTCCTGTGACTCCTTCAAGCTGCTCCAGGCCCTGCCAGACTACAGTCTGGGGCCCCACTACACCTCCCAAAAGGTGTCTGATAGCCTGGACAACCTCGAGGCGCCCCACTTCGCCCTGCCTGCCTTTTCTCCCCCTGGGGACGCCAGCACGTGCTTCCTGGAGTCCATCATGGGCTTGTCTGAGCCAGCCGCCGAGGCCCTTGCTCCCTTCATGGACGGCCAGTTGTTTGAGGACACTGCCCCAGCGTCGCTGGTGGAGCCTGTGTCTGTGTGA

Related Sequences

bmy_01656T0 SequenceType object (3)

Length: 628 aa      View alignments
>bmy_01656T0
PLPDAQSEGLLGRRLPAELASERASERGVAAQGAFPARTRVAALPLASVRIAGCLCPDPRVPLTTMTGLLKRKFDQLDEDSSSLCSSSSSLSSSGRHSPSCSPSSSASPSWDSDEEGPWDQMPLPDRDFCGPRSFTPLSILKRAPRKRPGRVAFDGITVFYFPRCQGFTSVPSRGGCTLGMASRHSAYRRFSLAEFTQEQARARQEKLRLRLKEEKLEALRWKDLAVAVAGGQLEEMTFLQPYPARKRRALLRASGVRRIDREEKRELQALRQSREDCGCRCDRVCDPETCSCSLAGIKCQMDHTAFPCGCCREGCENPKGRVEFNQARVQTHFIHTLTRLQLEQGAESLGELEAPAQGATFSPNEQVLAPTFPLAKPPVSSELGDNSCSSDMTDSSTASSSSEAPSGSAHPALPGPGFQPGVDDDSLARILSFSDSDLGGDGEEEEEGGVGSLDNLSCFHPADIFGTGDPAGLASWTHSYSSSSLASGILDENANLDASCFLNSGLESLGEGSLPGHPVPAITDASQSSSVDLSLSSCDSFKLLQALPDYSLGPHYTSQKVSDSLDNLEAPHFALPAFSPPGDASTCFLESIMGLSEPAAEALAPFMDGQLFEDTAPASLVEPVSV*