Part of scaffold_41 (Scaffold)

For more information consult the page for scaffold_41 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CMYA1 ENSBTAG00000046512 (Cow)

Gene Details

xin actin-binding repeat-containing protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000054446, Cow)

Protein Percentage 83.13%
cDNA percentage 88.85%
Ka/Ks Ratio 0.42687 (Ka = 0.0933, Ks = 0.2187)

XIRP1  (Minke Whale)

Gene Details

xin actin-binding repeat containing 1

External Links

Gene match (Identifier: BACU014612, Minke Whale)

Protein Percentage 97.78%
cDNA percentage 98.64%
Ka/Ks Ratio 0.54809 (Ka = 0.0111, Ks = 0.0203)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 5532 bp    Location:2611726..2603198   Strand:-
>bmy_01657
ATGGCCGACGCTCAGACGCAGGTGGCCCCCACCCCAAGCATCCCAGTGGCAGCTACAGAGGACCTGCCCCTCCCTCCACCACCTGCTCTGGAGGATCTGCCGCTGCCGCCACCCAAGGAGTCCTTCTCCAAGTTCCACCAGCAGCGGCAAGCCAGCGAGCTCCGCCGCCTCTACAAGCACATCCACCCCGAGCTCCGCAAGAATCTGGCTGAGGCTGTGGCTGAAGACTTGGCTGAGATCCTGGGTTCCGAAGAGCCCACTGAGGGTGATGTCCAGTGCATGCGCTGGATCTTTGAGAACTGGCGGCTGGACGCCATTGGGGACCATGAGAGGCCACCTGCCAAGGAGCCCGTGCCCGGCGGCAATGTCCAGGCCACCTCCCGCAAGTTTGAGGAAGGCTCCTTTGCCAACAGCACAGACCAGGAGCCAGCTGGACCTCGGCCATCTGGAGGGGACGTCCGTGCAGCCCGCTGGCTGTTTGAAACAAAGCCGCTGGATGAGCTCACGGGCCATGCTGAGGCACCGGAAGCTACAGTGAGGGAGCCTGCAGCCAGTGGAGATGTCCAGGGTACCAGGATGCTCTTTGAGACGCGGCCACTGGACCGCCTGGGCTCCCGCCCCTCCATTCAGGAGCAGAGCCCCTTGGAGCTGCGCTCAGAGATCCAGGAGCTGAAGGGCGATGTGAAGAAGACGGTGAAGCTGTTCCAAACAGAGCCGCTGTGTGCCATCCAGGACGCAGAGGGAGCCATCCATGAGGTCAAGGCCGCCTGCCGGGAGGAGATCCAAAGCAACGCGGTGAGGTCTGCCCGTTGGCTCTTCGAAACGCAGCCTCTGGACGCCATCAACCGGGACCCCAGCCAGGTGCGGGTGATCCGGGGGATCTCTCTGGAGGAGGCGGCCAGGCCCGACGTCAGCGCAACTCGCTGGATCTTTGAGACACAGCCCCTGGATGCCATCCGGGAGATCTTGGTGGACGAGAAGGACTTCCAGCCATCCCCAGATCTTATCCCTCCTGGTCCAGACGTTCAGCAGCAGCGGCATTTGTTTGAGACCCAAGCACTAGACACTCTAAAGGGGGAAGAGGAGGCTGGAGCAGAGGCGCCACCCAAAGAGGAAGTGGTCCCCGGTGATGTCCGCTCCACCCTGTGGCTATTTGAGATGCAGCCCCTGGATACACTCAGAGACAAGGTCCAAGTGGGTCACCTGCAGCGGGTGGGACCCCAGGAGGGTGAGAGGTTCATGTACGAGCGTCTATCCAGTGATGGTTCCTCAGCACTGTCCCTCTCTCAGAGTGCCCCCCAGAGGGATGGGGTGAAGGGAGACGTGAAGACCTTCAAGAACCTTTTTGAGACCCTACCCCTGGACAGCATCAGGCAGGGTGAAGCTGCGGCCCATGGGCGCATAAGCAGAGCAGAAGGAACTGATTCTGCTGGGCAGTCCCAGGACATAGGGTCCCCGGTGTATGCCATGCAGGATGGCAAAGGCCACCTCCATGCCCTGACCTCTGTCAGCAGAGAGCATGTAGTCGGAGGTGATGTACAGGGTTACAGGTGGATGTTTGAGACACAGCCCCTAGACCAACTAGGCCAAAACCCCAGTACCGTCGACGTGGTGCGGGGCATCACCCGGCAGGAAGTGGTGGCTGGAGACGTGGGCACTGCCCGGTGGCTCTTTGAGACCCAGCCCCTTGAGGTAATCCACCAACGGGAGCAGCAGGAACGACGGGAAGAAGAAGGAAAGCCTCAGGGAGGCCCTCAGCTTGAAGCATCCCCCAAGGGCGATGTGCAGACCATTCGCTGGTTGTTCGAGACATGCCCAATGAGTGAGTTGGGCAAGAAGCAGGGGTCAGAGATCACAGATTCCACACCCAAGGCCAAGGCACGGTCCTGCACCTGGATGTTCATGCCCCAACCCCCAGACAGACCAGAAAGCTCCAGGGAGCAGCACCTTGAGGTCARCCAGGTCCAGGCTGAGGAAAGACAGACAGACAGACACGTCTTTGAGACTGAGCCTCTGCAGGCCTCAGGCCATCCCTGCAGAAGGGGGCCTGTGCGATACTGCAGCAGAGTGGACATCCCCTCAGGGCAGGTGTCTCGTCAGAAGGAGGTTTTCCAGGCCCTGGAGGCAGGCAAGAGGGAAAACCAGGGATCCAGGGTAATCCCTGAGCCCATCCCAGCAGGCTCTGTGCACAAGTTCACCTGGCTCTTTGAGAATTGCCCCATGGGCTCCCTGGCAGCTGAGAGCATCCAAGGGGGCAACCACCAGGAAGAGCAGCCCGTGGGCCCCTCAGGCAATAGGGTGTGGGAGGGGCAACAGACTGCAGCTGAGGGGACCCTGCGGACTCTGCACGCCACGCCTGGCATCCTGCATCACGGAGGCATCGTCATGGAGGCCCGAGGGCCAGGGGAGCTCTGCCTTGCCAAGTACGTGCTCCCAGGCCCAGGGCAGGGCGGCCCCCACGTTCGGAAGGAGGAGCTGGTGTCTGGCGAGCTTCCCAGGATTGTCCGCCAAGTGCTGCACCGGCCAGACGTGGACCAGCAGGGGCTGCTGGTGCAGGAGGACCCAGTGGGCCAGCTTCGCCTCAAGCCACTGAAGCTGCCAGCACCAGGCAGCAGCTGGAAGGTCGAAGACATGGACCCTGAGTTCCAGCAGTTGCTGGCTTGTGGCCTCGGGACCTCGGTGGCGAGGACTGGGCTAGTGATGCAGGAGACAGAGCAGGGCCTAGTGGCACTGACCGCCTACTCTCTGCAGCCCCGGCTAACCAGCAGGGCCCCCGAGAGGAGCAGTGTGCAGATGCTGGCCAGCTGCATAGACAAAGGAGACCTGAGTGGCCTGCACAGTCTGCGGTGGGAGCCACCGGCTGACTCAAGTCCAGTGCCAGCCAGCGAGGGGGCCCAGAGGCTGCCCCTGACTGAGAGCATCATCCGTGTTCCCCCACTGGACCCCAGCATGGGGATGGGGCATCTGAGAGGGCCGGGGGCCACCCCCTGCCCCCCACAGGCCACTGGAAAGGCAGTCCCTCTGGCTAGGGAAGAAAAGCAGGAAAGCAGGTGCACTGGGCAGAAAGGGATGGAAGCTTTGGGAAAGTCAGATGGAGCCACGACTATGCCCCTGGGGCCCAAGTCCCCAAACCTCCAGGCTGCCATGCAGAGTCTGCGAATGGCAACAGCTGAAGCCCAAAGCCTGCACCAGCAAGTTCTGAGCAAGCACAAGCAGGGCCCCACCCCTGGAGCCGCCTCTATGCCCTCCCAGGATAGTCTTCTGCAAGTACCGGCCACAGCCACTGGGACTGCCCAGAGCAACACCAGGCCTCTGGCTGGAGGTGACCCCAGGATCCCAGCAGCCCCCAGAAAGGTCAGTGGGGAACAGAAAGCACTGCCTGGAGGGCTGCCTAGGGGGTGGGTGACTATTCAGGATGGCATTTACACTGCTCACCCCATCAGGACCTTTGACCTACCGGGGGGTGTCTGGCCTTCTGAGAGAGGAGCCTTGCCAAGGGGCAGGGAGACTGCGCTCCCGTCCCAGGCTCCCAGCCCACTCCTGGAAGGCCCAGGTCAGAGTCTCGGGCCTGGGCAAGAGGAGCCTGGGAGCCACACACAGAAGGCCTGGGGACCTCCAGAGAAGGTGATGGCAGGACTCGGCCCAGGGGTCCTCCAAGCTGCAGAGACCACCCTGAAGGCTGCCCCTTTAGCCCCCCACACTCTGGCCTCTGGGCCTCAGGCTGCAGGTGCCAGCCTGCACTCCCATAATGCCTCTGTTCCGCCTCCTCCTCCTCTCCCAGCTGCTGTGACAGGACCTGACTTCCCAGCCCAAGCCGGCCATGATGAGAATTCCATCCAGCAGGCCTCTGAGCCCACGCAGGACCCCCTTCTCCAGTCCCACAGCAGCCCTGCTGGCCAGAGAAGCCCTGGGGATTCACAGACAAAAACCCCGAAACTGGAGTCCACCACGCACCCAAGGAAGAAGCCCCAGCTGCCCCCCAAACCTGCACACCTAAGCCAGATCCCGCCCCCTCACTGGCTGCCCAAGCCCTCAGCCCTTTCTCCCAGCTCCTCTAAGGAGGTGGGGCAAGGAAAATACAGACAAGGTGAGACTGGTACAACTGACCATGACCCTCGGCCAACCAAGGTCCCCACCACTGCAGGCCAGGGCCGAGTATCGCGGGCTGGATGCTCCACTGGACAGAGCCAGCACAGCCCCCAGCATGACTCCAGCACCGTGGCCCCCAGGCCCACCAAAAGTCAGGCTGCGGGCAGCAACGACCAGAGCCCTGAGCCCCTCGAGCTCTCAGCTCTCAGCAGTGACCCCACCTCACCGCAGCAGGGCCCCAGCCCCTCAGGAGAGAAGTGCACAGACGGTTCCCAGCAAGGGGTCCCTGAGAGCCCCAAGATTCTGCAGGGAAGCCAGCAAGAGCTCCAGGGCCTCCTGAGCCAGGTGCAAGCACTGGAGAAGGAGGCCAAAAGTGCTGTGGACGTGCGGGCACTGAGGAGGCTCTTTGAGGCTGTGCCCCAGCTGAGAGGGGCCCCTCCAGCTCCCGCTGCCCCCCACAAGCCCAAGGCCTCAGTGGAGCAGGCCTTTGGGGAGCTGACAAGGGTCAGCACGGAGGTGGCCCGGCTGAAGGAACAGACCCTGGCCAGGCTGCTGGACATCGAGGAGGCCGTGCACAAGGCCCTCAGCTCCATGTCTAGCCTCCAGCCTGGGACTAACACCAGAGGCCGTTCCCAGGGACCTCTAAAGGACCACAGTGCCCACAAGGTCAGTGTCACAGACAGCAGTAGAGTCAGGCCCAACTGCCCAGGCCAGGAGGTCAGGAGCCAAACTGCAGTCAAGAGCCAAACTGAGGTTACATGCCACACTGAGGTCCAGGGTCAGGCCAAGGTCAGAAATCACACTGAGGTCAGAAGTCAAGCAGCCCCAACCACCCCTTCTACTCGGAGGCTGGAGACCTTGAGAGAAGAGTCAAGCCTCCCTCGAGTGTTACCTCCCAGCAGAGATTCACCCTCCTCCCCAACCTTTATCTCCATCGAGTCAGCCACTAGGAAGCTTCTGGAGGCTCCCAGCCCCAGGTGCAGCCCCGAGGTCTCAGTGAAAAGCACACACCTCCCCCAGGATGTGGGCCAGGCTCAGCCCCACCAGAAAGATGTCTGGAACAAGGCCGGGAAGAAAGAAGCCACCCAGTGCTCTGGACAGCCCCAGCATGCCCCTGCCTCAGCCAGCCCCCTGCCCACCAGGCAGCAGAAAAGTGTTCTGGAGCTGCAGACTGGGCCCGGTGGCTCCCAGCACTATGGAGCCACAAGAACAGTGACCGAGCAATATGAGAGGGTGGACCAGTGCAGGACCTCAGTGCTCACCTCCCCCACCATGGTCACCGAGCCCGCAGAGCCGCCCAGGGGCCCAGGCCCCCACCTCGGGCTCCACGCCTCCCCCTTGCTGAGGCAGTTCCTGCACAGTCCAGCCGGGCTCAGCACAGGCCTGGCAGAAGCTGGGAAGGTGTGTGTGCCCTGCGGCCACTCCCAGCCAGCTGCCCAGTGA

Related Sequences

bmy_01657T0 Protein

Length: 1844 aa      View alignments
>bmy_01657T0
MADAQTQVAPTPSIPVAATEDLPLPPPPALEDLPLPPPKESFSKFHQQRQASELRRLYKHIHPELRKNLAEAVAEDLAEILGSEEPTEGDVQCMRWIFENWRLDAIGDHERPPAKEPVPGGNVQATSRKFEEGSFANSTDQEPAGPRPSGGDVRAARWLFETKPLDELTGHAEAPEATVREPAASGDVQGTRMLFETRPLDRLGSRPSIQEQSPLELRSEIQELKGDVKKTVKLFQTEPLCAIQDAEGAIHEVKAACREEIQSNAVRSARWLFETQPLDAINRDPSQVRVIRGISLEEAARPDVSATRWIFETQPLDAIREILVDEKDFQPSPDLIPPGPDVQQQRHLFETQALDTLKGEEEAGAEAPPKEEVVPGDVRSTLWLFEMQPLDTLRDKVQVGHLQRVGPQEGERFMYERLSSDGSSALSLSQSAPQRDGVKGDVKTFKNLFETLPLDSIRQGEAAAHGRISRAEGTDSAGQSQDIGSPVYAMQDGKGHLHALTSVSREHVVGGDVQGYRWMFETQPLDQLGQNPSTVDVVRGITRQEVVAGDVGTARWLFETQPLEVIHQREQQERREEEGKPQGGPQLEASPKGDVQTIRWLFETCPMSELGKKQGSEITDSTPKAKARSCTWMFMPQPPDRPESSREQHLEVXQVQAEERQTDRHVFETEPLQASGHPCRRGPVRYCSRVDIPSGQVSRQKEVFQALEAGKRENQGSRVIPEPIPAGSVHKFTWLFENCPMGSLAAESIQGGNHQEEQPVGPSGNRVWEGQQTAAEGTLRTLHATPGILHHGGIVMEARGPGELCLAKYVLPGPGQGGPHVRKEELVSGELPRIVRQVLHRPDVDQQGLLVQEDPVGQLRLKPLKLPAPGSSWKVEDMDPEFQQLLACGLGTSVARTGLVMQETEQGLVALTAYSLQPRLTSRAPERSSVQMLASCIDKGDLSGLHSLRWEPPADSSPVPASEGAQRLPLTESIIRVPPLDPSMGMGHLRGPGATPCPPQATGKAVPLAREEKQESRCTGQKGMEALGKSDGATTMPLGPKSPNLQAAMQSLRMATAEAQSLHQQVLSKHKQGPTPGAASMPSQDSLLQVPATATGTAQSNTRPLAGGDPRIPAAPRKVSGEQKALPGGLPRGWVTIQDGIYTAHPIRTFDLPGGVWPSERGALPRGRETALPSQAPSPLLEGPGQSLGPGQEEPGSHTQKAWGPPEKVMAGLGPGVLQAAETTLKAAPLAPHTLASGPQAAGASLHSHNASVPPPPPLPAAVTGPDFPAQAGHDENSIQQASEPTQDPLLQSHSSPAGQRSPGDSQTKTPKLESTTHPRKKPQLPPKPAHLSQIPPPHWLPKPSALSPSSSKEVGQGKYRQGETGTTDHDPRPTKVPTTAGQGRVSRAGCSTGQSQHSPQHDSSTVAPRPTKSQAAGSNDQSPEPLELSALSSDPTSPQQGPSPSGEKCTDGSQQGVPESPKILQGSQQELQGLLSQVQALEKEAKSAVDVRALRRLFEAVPQLRGAPPAPAAPHKPKASVEQAFGELTRVSTEVARLKEQTLARLLDIEEAVHKALSSMSSLQPGTNTRGRSQGPLKDHSAHKVSVTDSSRVRPNCPGQEVRSQTAVKSQTEVTCHTEVQGQAKVRNHTEVRSQAAPTTPSTRRLETLREESSLPRVLPPSRDSPSSPTFISIESATRKLLEAPSPRCSPEVSVKSTHLPQDVGQAQPHQKDVWNKAGKKEATQCSGQPQHAPASASPLPTRQQKSVLELQTGPGGSQHYGATRTVTEQYERVDQCRTSVLTSPTMVTEPAEPPRGPGPHLGLHASPLLRQFLHSPAGLSTGLAEAGKVCVPCGHSQPAAQ*