Part of scaffold_41 (Scaffold)

For more information consult the page for scaffold_41 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CX3CR1 ENSTTRG00000003215 (Bottlenosed dolphin)

Gene Details

chemokine (C-X3-C motif) receptor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003014, Bottlenosed dolphin)

Protein Percentage 97.77%
cDNA percentage 97.67%
Ka/Ks Ratio 0.21968 (Ka = 0.0116, Ks = 0.0529)

CX3CR1 ENSBTAG00000002923 (Cow)

Gene Details

CX3C chemokine receptor 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003797, Cow)

Protein Percentage 85.2%
cDNA percentage 89.76%
Ka/Ks Ratio 0.37819 (Ka = 0.0806, Ks = 0.2132)

CX3CR1  (Minke Whale)

Gene Details

chemokine (C-X3-C motif) receptor 1

External Links

Gene match (Identifier: BACU014611, Minke Whale)

Protein Percentage 98.32%
cDNA percentage 98.6%
Ka/Ks Ratio 0.24842 (Ka = 0.0067, Ks = 0.0271)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1077 bp    Location:2682456..2672150   Strand:-
>bmy_01658
ATGCCCACCATCTCCCCTGAATCAAGTTTAGAAGACTTTGARTATGATGAGCTTGCAGAAGCCTGTGATATGGGGGACATCGTGGCCTTGGGAACTGTCTTCCTGGCCATACTCTACTCCCTTGTCTTTGCCTTTGGCCTGGTGGGAAATTTGTTGGTGGTGTTTGCCCTCACCAACAGCCAGAAGCCCAAGAGCATCACTGACGTTTACCTCCTGAACCTGGCCTTTTCTGATCTGCTCTTTGTAGCCACCTTGCCCTTCTGGACTCACTATCTTATAAACGAGCAAGGCCTTCATAATGCCGTGTGCAAACTCACCACCACCTTCTTCTTCATTGGGTTTTTTGGAGGCATATTCTTCATCACCATCATCAGCATCGACAGGTACCTGGCCATTGTCCTGGCCGCCAACTCCATGAACAACCGGACCGTGCAGCATGGCGTCACCATCAGCCTTGGCGTCTGGGCAGCCGCCATCTTGGTGGCCGCACCCCAGTTCATGTTCACCAAACAGAAAGAAAACGAATGCCTTGGTGACTACCCCGAGGTCCTACAGGAAATCTGGCCTGTGCTCCGCAATGTAGAAATAAATTTTCTTGGCTTCCTGCTCCCCCTGCTTATTATGAGTTACTGTTACTTCAGAATCATGCGGACACTTTTTTCCTGCAAAAACCAAAAGAAAGCTAAAGCCATTAGGCTGATCTTTCTTGTGGTCATCATGTTTTTCCTCTTCTGGACACCCTACAACGTCATGMTTTTCTTAGAGACACTCAATCTCTATGACTTCTTTCCCAGCTGTGACATGAAGAGGGATCTGAGGTTGGCCCTCAGTGTGACCGAGACAGTTGCATTTACCCACTGTTGCCTTAATCCCCTTATCTATGCATTTGCTGGAGAGAAGTTCAGAAGATACCTTTACCACCTGTACAGGAAATGCCTGGCTGTCCTGTGTGGCCATCCCGTCCACGTCAGTTTCTCCCTGTCCCCATCTGAATCACAAAGGAGCAGGCGAGAAAGTGTTCTGAGCAGCAATTTCACTCATTACACCAGTGATGGAAATACATCCATCCTCCTCTGA

Related Sequences

bmy_01658T0 Protein

Length: 359 aa      View alignments
>bmy_01658T0
MPTISPESSLEDFEYDELAEACDMGDIVALGTVFLAILYSLVFAFGLVGNLLVVFALTNSQKPKSITDVYLLNLAFSDLLFVATLPFWTHYLINEQGLHNAVCKLTTTFFFIGFFGGIFFITIISIDRYLAIVLAANSMNNRTVQHGVTISLGVWAAAILVAAPQFMFTKQKENECLGDYPEVLQEIWPVLRNVEINFLGFLLPLLIMSYCYFRIMRTLFSCKNQKKAKAIRLIFLVVIMFFLFWTPYNVMJFLETLNLYDFFPSCDMKRDLRLALSVTETVAFTHCCLNPLIYAFAGEKFRRYLYHLYRKCLAVLCGHPVHVSFSLSPSESQRSRRESVLSSNFTHYTSDGNTSILL*