Sequence detailsbmy_01673 (Coding sequence)

Part of scaffold_42 (SequenceType object (1))

For more information consult the page for scaffold_42 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MDH1BENSTTRG00000009828 (Bottlenosed dolphin)

Gene Details

malate dehydrogenase 1B, NAD (soluble)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009311, Bottlenosed dolphin)

Protein Percentage 91.49%
cDNA percentage 94.19%
Ka/Ks Ratio 0.69712 (Ka = 0.0476, Ks = 0.0683)

MDH1BENSBTAG00000016192 (Cow)

Gene Details

Putative malate dehydrogenase 1B

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000038086, Cow)

Protein Percentage 86.89%
cDNA percentage 90.49%
Ka/Ks Ratio 0.3339 (Ka = 0.0695, Ks = 0.2081)

Additional orthologs identified in other species via the OPTIC pipeline.

MDH1B (Human)   Mdh1b (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1518 bp    Location:1198213..1227484   Strand:+
Raw sequence 
>bmy_01673
ATGGCCAAATTCGTACTCGCTGGTAGAGCAGATTGCCCATATTATGCTAAAGCAGAACTTCTGGCAGATTATTTACAAAAGAATCTTCCTGATTTTCGGATACATAAAATTATACAACATCCTGATGTTTGGGAGGAGTGGCTGAAAGAGTTGTGTAAAAAGAATAAGTGGAGTCACAAAACTTCCCCCATCATCTGGAGAGAGCTGTTGGATCGTGGAGGAAAGGGTTTGCTTTTGGGAGGATATAATGAGTTCCTAGAACATGCCCAGCTTTACTATGGTGTCACCTCTAGCATGACGACTGAGCTGATGAAGACAGTTGCTCAAGAGAACCTGGGGACACATATAGAAAAAGAGCTGGAGAAAGAAGCCCTGAAAGGTCTCATCAACCCCTTGCAGGTCTGGATCACCAGTGCATCGGCTCCTGCCTGCTACAACCTAATTCCCATCTTGACAAGTGGTGAAGTGTTTGGACCGCATATGGAAATTAGCATAAACCTATTTGACAACAAGCAGGCAGAAGAAAAACTCACAAGCCTTGTGAAAGAGGCTCAGGACCTGGCGTCGCCCTTCCTGCAGAGTGTGTCCGTCTGCACCCGAGCGGAGGAGGCCTTCCGCCAGGCCCACGTGATCATCTTCCTCGACGACCACGTGGACAAGGAGGTGTACAGTTTGGAAGACTGCATCCGAAGCAGGGCTACTCTGTGCCACCTCTACGGATCCCTGATTGAGAAAAATGCTCATGATTCCGTCAGAATTATTGTGGGAGGAAAAACCTTTGTGAATCTCAAAACGTCTTTGCTTATGAGATACGCCCCAAACTTCGCTCACAATATTGTCGCTGTGGCCTTGGGCGTAGAAGGCAAAGCGAAGGCGGAGCTGGCCAGAAAACTGAAAACGACTCCCTCATGCATCAAAGATGTGATAATTTGGGGTAATATTAGTGGAAATAACTACGTCGATCTGAGAAAAGCCAAGGTTTACAGATATGAGAGTGCTGTTTGGGGACCTCCTCACTATTCACGCCCTGTTTTAAGCCTGATTTTTGATAGTGAGTGGGTAAACAGAGAATTTGTGGTAAGTCTTAAAAAGTTCACCGCCACAGGAAGACAATTTGGAGGCATCTTAGCTGCACACAGTATAGCCACTACGTTGAAATACTGGTACCATGGCTCACCCCCTGGGGAGATTGTGTCTTTAGGGGTACTGAGTGAAGGCCAGTTTGGTATTCCTGAAGGGATTGTCTTTTCTATGCCTGTGAAATTTGAGAATGGAACTTGGGTGGTTCTTACAGATCTCGAAGATATTGAAATAAGTGAACAAATAATGACCAGAATGACAAGTGATCTGATTCAGGAGAAACTTGTTGCACTTGGCGAGTTGATACATTTTCAGCCATATCAATCAGAAACCGACTTAGCCAAAGAAGATGAAAAGACCACCTTACCCACCACAAATGACAACCGGGAACATTGGAAAGTCTCAGATGATTCTGAAGGCAAAACTATGGAACAGTAG

Related Sequences

bmy_01673T0 SequenceType object (3)

Length: 506 aa      View alignments
>bmy_01673T0
MAKFVLAGRADCPYYAKAELLADYLQKNLPDFRIHKIIQHPDVWEEWLKELCKKNKWSHKTSPIIWRELLDRGGKGLLLGGYNEFLEHAQLYYGVTSSMTTELMKTVAQENLGTHIEKELEKEALKGLINPLQVWITSASAPACYNLIPILTSGEVFGPHMEISINLFDNKQAEEKLTSLVKEAQDLASPFLQSVSVCTRAEEAFRQAHVIIFLDDHVDKEVYSLEDCIRSRATLCHLYGSLIEKNAHDSVRIIVGGKTFVNLKTSLLMRYAPNFAHNIVAVALGVEGKAKAELARKLKTTPSCIKDVIIWGNISGNNYVDLRKAKVYRYESAVWGPPHYSRPVLSLIFDSEWVNREFVVSLKKFTATGRQFGGILAAHSIATTLKYWYHGSPPGEIVSLGVLSEGQFGIPEGIVFSMPVKFENGTWVVLTDLEDIEISEQIMTRMTSDLIQEKLVALGELIHFQPYQSETDLAKEDEKTTLPTTNDNREHWKVSDDSEGKTMEQ*