Part of scaffold_43 (Scaffold)

For more information consult the page for scaffold_43 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCDC42 ENSTTRG00000006539 (Bottlenosed dolphin)

Gene Details

coiled-coil domain containing 42

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006188, Bottlenosed dolphin)

Protein Percentage 79.05%
cDNA percentage 80.21%
Ka/Ks Ratio 0.15818 (Ka = 0.0175, Ks = 0.1103)

CCDC42  (Minke Whale)

Gene Details

coiled-coil domain containing 42

External Links

Gene match (Identifier: BACU001210, Minke Whale)

Protein Percentage 91.99%
cDNA percentage 93.8%
Ka/Ks Ratio 0.26386 (Ka = 0.05, Ks = 0.1894)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 951 bp    Location:1134366..1146778   Strand:+
>bmy_01698
ATGAGTCTGGGCATCATGGAGGAGGAGGATCTGGCCGAGTACTTCCGGTTGCAGTATGGGGAACGGCTGCTGCAGCTGCTGCAGAAGTTCCCCAGCATTGAGGACCACTCAGACTCCCCATCCATCCGGCTACTGGAGAAGAAGAAAGAGGCCAAGATCATGCACCATGCCATGCAGCAGAAGAAGGAGACATTTCAGCGCAGAATGGAAACCCTGAACCTGCGCTGGGAGGAGCTGGGAGTCAAGGAGGCCCAGCTGAAAGCCCACATACAGAAGTTTGAGCAGTTCATCCAGGAGAACGACCAGAAACGGATCCGGGCCCTGAAGAAGGCCAACAAGGAGCGAGAACTCAAGAGGCAGTGCACACGCGAGCTGGCCAAGGCCAAGCAGGAGATGGCGGCCCTGCGGCTGGAGCACCAGCGGCTGAGCGCCAAGCTGCAGGAATACTCCATCTTCAACAAGTACCTGGAGAAGGTGGTGGAGAACTCCGAGTTCGAAGAGATCCACGAGGTGATCGCGCGCTACAAGACGCTGGTGAGCATGCACGAGGACCTCATGCAGTCGGCGCAGGAGGGCCAGGAGAAGGTCGAGCGCGCCAAGGCCCGGCTGGCGCGCTACAAGGAGGAGAAGGACGACGAGATCCTGCAGCATAACAACGAGCTGGCGCGCCTGCAGATGCGCTTCGACCGCGCCCGCAGCGACGTCATCATCTGGGAATCTCGCTGGGCACACATCCAGAACACCGCCGCCAAGAAGACCCTCTTGCTTGGCACCATTAAGATGGCAACGCTGAACCTCTTCCAGATCGTGAGCAAGCAGCTGAAGGAGGCGAGCCTCGTGTCCCTGGAGGACACACACAAACAGCTGGACACGATCCAGCAGTTTATCCAGGACCTGTCAGACATCTGGGCAGAGGTGAAGAAGAAGGAGCAGCAGCAAGTCCGGGTTTAA

Related Sequences

bmy_01698T0 Protein

Length: 317 aa     
>bmy_01698T0
MSLGIMEEEDLAEYFRLQYGERLLQLLQKFPSIEDHSDSPSIRLLEKKKEAKIMHHAMQQKKETFQRRMETLNLRWEELGVKEAQLKAHIQKFEQFIQENDQKRIRALKKANKERELKRQCTRELAKAKQEMAALRLEHQRLSAKLQEYSIFNKYLEKVVENSEFEEIHEVIARYKTLVSMHEDLMQSAQEGQEKVERAKARLARYKEEKDDEILQHNNELARLQMRFDRARSDVIIWESRWAHIQNTAAKKTLLLGTIKMATLNLFQIVSKQLKEASLVSLEDTHKQLDTIQQFIQDLSDIWAEVKKKEQQQVRV*