Sequence detailsbmy_01723 (Coding sequence)

Part of scaffold_43 (SequenceType object (1))

For more information consult the page for scaffold_43 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHD3ENSTTRG00000010295 (Bottlenosed dolphin)

Gene Details

chromodomain helicase DNA binding protein 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009773, Bottlenosed dolphin)

Protein Percentage 96.26%
cDNA percentage 95.29%
Ka/Ks Ratio 0.02754 (Ka = 0.0015, Ks = 0.0531)

BT.45569ENSBTAG00000014377 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019119, Cow)

Protein Percentage 98.75%
cDNA percentage 95.04%
Ka/Ks Ratio 0.03158 (Ka = 0.0069, Ks = 0.2178)

CHD3 (Minke Whale)

Gene Details

chromodomain helicase DNA binding protein 3

External Links

Gene match (Identifier: BACU001229, Minke Whale)

Protein Percentage 93.31%
cDNA percentage 93.99%
Ka/Ks Ratio 0.40954 (Ka = 0.0496, Ks = 0.1212)

Additional orthologs identified in other species via the OPTIC pipeline.

CHD3 (Human)   Chd3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 5823 bp    Location:1836073..1815567   Strand:-
Raw sequence 
>bmy_01723
AGGCTTAGGTTTTCTGGTGCTCTCTGCTCCAAAGATAAGGATGACATTCGGCTGCTGCCTTCAGCACTGGGTGTGAAGAAGAGAAAAAGAGGACCCAAGAAGCAGAAGGAGAACAAGCCAGGAAAACCCCGAAAACGCAAGAAGCTTGTGGAACAGAAGTCGTCGGCAACTCTGCTTCTGACGTGGGGCCTGGAGGACGTGGAGCATGTGTTCTCTGAGGAGGATTACCACACGCTCACCAACTACAAAGCCTTCAGCCAGCCCCTGATCGCTAAGAAGAATCCTAAGATCCCAATGTCTAAGATGATGACCATCCTTGGGGCCAAGTGGAGAGAGTTCAGCGCCAACAACCCCTTCAAGGGGTCGGCAGCTGCTGTGGCGGCAGCGGCGGCAGCAGCGGCCGCAGCTGTAGCTGAGCAGGTGTCAGCTGCTGTCTCATCGGCCACCCCCATAGCACCTTCTGGACCCCCCGCCCTTCCACCACCCCCTGCTGCTGATATCCAGCCCCCACCCATCCGAAGAGCCAAAACCAAAGAGGGCAAAGGTCCAGGCCACAAGAGGCGGAGTAAGAGTCCCCGAGTGCCTGATGGACGCAAGAAGCTTCGGGGAAAGAAGATGGCACCACTCAAGATCAAACTAGGGCTGCTGGGTGGCAAGAGGAAGAAGGGAGGCTCGAGTGACGAGGGCCCTGAACCAGAGGCTGAGGAGTCAGACCTGGACAGTGGCAGTGTCCACAGTGCCTCAGGCCGCCCTGATGGCCCTGTCCGCACCAAGAAACTAAAGAGAGGCCGGCCAGGAAGGAAGAAGAAGAAGGTCCTGGGCTGTCCTGCAGTGGCCGGGGAGGAGGAGGTTGATGGCTACGAGACGGATCACCAGGATTACTGTGAGGTGTGCCAGCAGGGTGGGGAAATTATTCTGTGTGACACCTGCCCTCGTGCCTACCACCTCGTCTGCCTTGATCCTGAGCTTGACCGGGCTCCTGAGGGCAAATGGAGCTGCCCCCACTGTGAGAAGGAGGGGGTACAGTGGGAGGCCAAGGAGGAGGAGGAAGACTATGAAGAGGAGGGGGAAGAGGAGGGGGAGAAGGAGGAAGAGGACGACCACATGGAGTACTGCCGTGTGTGCAAGGATGGCGGGGAGCTCCTGTGCTGTGACGCCTGCATCTCCTCCTACCACATTCACTGTCTGAACCCCCCGCTGCCTGACATCCCCAACGGCGAATGGCTGTGTCCCCGATGCACATGTCCTGTGCTGAAAGGCCGTGTGCAGAAGATCCTGCACTGGCGGTGGGGGGAGCCCCCCGTGGCAGTGCCAGCCCCCCAACAGGCAGACGGGAATCCAGATGCCCCACCCGCACGTCCTCTTCAAGGCAGATCGGAGAGAGAGTTCTTTGTCAAGTGGGTAGGACTGTCCTACTGGCACTGCTCCTGGGCCAAGGAGCTTCAGCTGGAAATTTTCCACTTGGTAATGTACCGAAACTACCAACGGAAGAATGACATGGACGAGCCCCCACCCCTGGACTACGGCTCTGGTGAGGATGATGGGAAGAGTGACAAACGCAAGGGGAAGGACCCGCACTATGCCGAGATGGAGGAGAAGTACTACCGTTTTGGCATCAAGCCAGAGTGGATGACCGTCCACCGGATCATCAACCACAGTGTGGATAAGAAGGGAAATTACCACTATCTAGTGAAATGGAGGGACTTGCCATATGACCAGTCCACGTGGGAGGAAGATGAAATGAACATCCCTGAATATGAAGACCATAAACAAAGCTACTGGAGACACCGAGAACTAATTATGGGGGAGGACCCCGCCCAGCCCCGCAAGTATAAGAAGAAGAAGAAGGAGCTGCAGGGCGATGGGCCTCCCAGCTCGCCTACTAATGATCCTACAGTGAAATACGAGACTCAGCCACGGTTCATCACAGCCACTGGAGGCACACTGCACATGTATCAGCTGGAGGGGTTGAACTGGCTACGCTTCTCGTGGGCCCAGGGCACTGACACCATTCTGGCTGATGAGATGGGACTGGGCAAGACCATACAAACCATCGTCTTCCTCTACTCACTGTATAAGGAGGTGCTAGACTCTCGGGCCCTGAGGGGGACAGCCGTGCTGAGGCCTAGCCTGGACTGGGGAAGGTGGGAGTGGAGGGGCCACACAAAGGGTCCCTTCCTGGTGAGCGCCCCGCTCTCCACCATCATTAACTGGGAGCGGGAGTTCCAGATGTGGGCACCCAAGTTCTATGTGGTGACATACACGGGTGACAAGGACAGCCGAGCCATCATTCGTGAGAATGAGTTTTCCTTTGAAGACAATGCCATCAAAGGTGGCAAGAAAGCTTTTAAGATGAAGAGGGAGGCGCAGGTGAAGTTCCATGTTCTCCTGACATCATATGAGCTGATCACCATTGATCAGGCAGCTCTTGGCTCCATCCGCTGGGCCTGTCTTGTGGTGGATGAGGCCCATCGGCTCAAGAACAACCAGTCCAAGTTTTTCAGGGTCCTCAATGGCTACAAGATAGATCATAAGTTGCTGCTGACAGGGACTCCATTGCAGAATAATCTGGAGGAGCTCTTCCATCTGCTGAACTTCCTCACCCCAGAGAGGTTTAACAATCTGGAAGGCTTCCTGGAGGAGTTTGCCGACATATCCAAAGAAGACCAGATTAAGAAACTTCATGATTTGCTGGGGCCACATATGCTGAGGAGGCTCAAGGCTGACGTCTTTAAGAATATGCCGGCCAAGACAGAGCTCATCGTCCGCGTGGAGCTGAGCCCCATGCAGAAGAAATACTACAAGTATATCCTGACCCGAAATTTTGAGGCCTTGAATTCACGAGGAGGTGGGAACCAAGTGTCATTGCTTAACATCATGATGGATCTTAAGAAGTGCTGCAACCATCCATACCTCTTTCCTGTGGCTGCTATGGAGTCCCCCAAACTTCCCAGTGGGGCATATGAGGGTGGGGCACTTATTAAGGCGTCTGGGAAGCTCATGCTGCTGCAGAAGATGCTGCGGAAGCTGAAGGAGCAAGGACACAGAGTGCTCATCTTCTCGCAGATGACCAAAATGTTAGACTTGCTAGAGGACTTCTTAGACTACGAAGGCTACAAGTATGAGCGCATTGACGGCGGCATCACTGGTGCCCTGAGGCAGGAGGCCATCGATCGCTTCAATGCTCCGGGGGCCCAACAATTCTGCTTCCTCCTGTCCACCCGGGCTGGAGGCCTGGGCATCAATCTGGCCACTGCCGACACTGTCATCATCTTTGATTCAGACTGGAACCCCCATAATGATATCCAGGCCTTCAGCCGTGCTCATCGGATCGGCCAGGCCAACAAAGTGATGATTTACCGGTTTGTGACTCGCGCATCAGTGGAAGAGCGAATCACACAGGTGGCCAAGAGAAAGATGATGCTGACACATCTGGTGGTGCGGCCTGGGCTGGGCTCCAAGGCGGGCTCCATGTCCAAGCAGGAGCTGGATGACATCCTCAAATTTGGCACCGAGGAGCTATTTAAGGATGAAAATGAGGGGGAGAACAAGGAGGAGGACAGCAGTGTGATTCACTACGACAACGAGGCCATCGCTCGGCTCTTGGACCGGAACCAGGATGCAACTGAGGACACTGATGTGCAGAACATGAACGAGTATCTCAGCTCCTTCAAGGTGGCCCAGTACGTGGTGAGGGAAGAAGACAAGATTGAGGAAATTGAACGAGAGATCATCAAGCAGGAGGAGAACGTGGATCCTGACTACTGGGAGAAGCTGCTGAGACACCACTATGAGCAGCAGCAGGAAGACCTGGCCCGAAACCTCGGCAAAGGCAAGAGGGTCCGCAAGCAGGTTAACTACAACGATGCTGCTCAGGAGGACCAAGATAACCAGTCAGAATACTCAGTGGGATCAGAGGAGGAGGATGAAGACTTTGATGAGCGTCCTGAAGGGCGTCGACAGTCCAAGAGGCAGCTCCGGAACGAAAAGGATAAGCCACTGCCTCCACTGCTGGCTCGAGTTGGGGGCAACATTGAGGTGTTGGGATTCAACACCCGTCAGCGGAAGGCCTTCCTCAATGCTGTGATGCGCTGGGGCATGCCACCACAGGACGCCTTCACCACCCAGTGGCTGGTGCGGGACCTCAGGGGCAAGACTGAAAAAGAGTTCAAGGCCTATGTGTCTTTGTTCATGCGCCATCTCTGTGAGCCCGGGGCAGACGGCTCTGAAACCTTTGCTGACGGGGTCCCTCGGGAGGGACTGAGTCGCCAGCAAGTGTTGACCCGCATTGGAGTCATGTCTCTCGTCAAGAAGAAGGTTCAGGAGTTTGAGCACATCAATGGGCGCTGGTCTATGCCGGAGCTGATGCCTGACCCCAGTGCTGACTCCAAGCGCTCCTCCAGAGCCTCCTCTCCTACCAAGACGTCTCCCACCACTCCTGAGGCTTCTGCTGCAAACAGTCCTTGCACCTCAAAACCTGCTACTCCAGCTCCCAGTGAGAAAGGAGATGGCATAAGGACACCTCTGGAGAAGGATGAAGCAGAAAACCAGGAGGAGAAGCCAGAGAAGAATAGCAAAATTGGGGAGAAGATGGAAACAGAGGCTGATACCCCCAGCCCAGCCCCATCACTTGGGGAGCGGCTGGAGTCAAGGAAGATTCCTCTAGAGGATGAGGTGCCAGGGGTACCTGGAGAGATGGAGCCTGAACCTGGGTACCGTGGGGACAGAGAGAAGTCAGCCACAGAGTCGACGCCAGGAGAGAGGGGGGAGGAGAAGCCGATGGATGGACAGGAAAACAGGGAGAGGCCGGAGGGGGAGACGGGGGATTTGGGCAAGAGAGCAGAAGATGTAAAAGGGGACCGGGAGCTTCGACCTGGGCCTCCTCGAGACGAGCCGCGGTCCAACGGGCGACGTGAGGAGAAGGCAGAGAAGCCGCGGTTCATGTTCAATATTGCAGATGGTGGCTTCACAGAGCTCCACACGCTGTGGCAGAATGAGGAACGGGCAGCTGTTTCCTCGGGGAAACTCAATGAGATCTGGCACCGAAGACATGACTATTGGCTTCTGGCTGGGATTGTCCTCCATGGCTACGCACGGTGGCAGGACATCCAGAATGATGCTCAGTTTGCCATTATCAACGAGCCATTTAAAACTGAAGCCAATAAGGGGAACTTTCTGGAGATGAAAAATAAGTTCCTGGCCCGGAGATTCAAGCTCCTGGAGCAGGCGCTGGTGATTGAGGAGCAGCTGCGGCGGGCGGCCTACCTGAACCTATCACAGGAGCCGGCGCACCCCGCCATGGCCCTCCACGCCCGCTTCGCCGAGGCCGAGTGCCTGGCCGAGAGCCACCAGCACCTCTCCAAGGAGTCGTTGGCGGGGAACAAGCCGGCCAACGCCGTGCTGCACAAGGTTCTGAACCAGCTGGAGGAGTTGCTGAGCGACATGAAGGCGGACGTGACCCGCCTGCCAGCCACGCTGTCCCGAATACCCCCCATCGCAGCCCGCCTTCAGATGTCCGAGCGCAGCATCCTCAGCCGGCTGGCCAGCAAGGGCACGGAGCCTCACCCCACACCGGCCTTCCCCCCGGGTCCGTACGCTACACCTCCGGGGTACGGGGCGGCCTTCAGCGCCGCACCCGTAGGGGCCCTGGCCGCCGCAGGCGCCAATTACAGCCAGATGCCTGCAGGGTCCTTCATCACAGCCGCCACCAACGGCCCTCCAGTGCTGGTGAAGAAGGAGAAGGAAATGGTGGGGGCATTGGTGTCAGACGGGCTGGATCGGAAGGAGCCCCGAGCCGGGGAGGTGATCTGTATAGACGACTGA

Related Sequences

bmy_01723T0 SequenceType object (3)

Length: 1941 aa      View alignments
>bmy_01723T0
RLRFSGALCSKDKDDIRLLPSALGVKKRKRGPKKQKENKPGKPRKRKKLVEQKSSATLLLTWGLEDVEHVFSEEDYHTLTNYKAFSQPLIAKKNPKIPMSKMMTILGAKWREFSANNPFKGSAAAVAAAAAAAAAAVAEQVSAAVSSATPIAPSGPPALPPPPAADIQPPPIRRAKTKEGKGPGHKRRSKSPRVPDGRKKLRGKKMAPLKIKLGLLGGKRKKGGSSDEGPEPEAEESDLDSGSVHSASGRPDGPVRTKKLKRGRPGRKKKKVLGCPAVAGEEEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEEEDYEEEGEEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKGRVQKILHWRWGEPPVAVPAPQQADGNPDAPPARPLQGRSEREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRKGKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEEDEMNIPEYEDHKQSYWRHRELIMGEDPAQPRKYKKKKKELQGDGPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEVLDSRALRGTAVLRPSLDWGRWEWRGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDENEGENKEEDSSVIHYDNEAIARLLDRNQDATEDTDVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARVGGNIEVLGFNTRQRKAFLNAVMRWGMPPQDAFTTQWLVRDLRGKTEKEFKAYVSLFMRHLCEPGADGSETFADGVPREGLSRQQVLTRIGVMSLVKKKVQEFEHINGRWSMPELMPDPSADSKRSSRASSPTKTSPTTPEASAANSPCTSKPATPAPSEKGDGIRTPLEKDEAENQEEKPEKNSKIGEKMETEADTPSPAPSLGERLESRKIPLEDEVPGVPGEMEPEPGYRGDREKSATESTPGERGEEKPMDGQENRERPEGETGDLGKRAEDVKGDRELRPGPPRDEPRSNGRREEKAEKPRFMFNIADGGFTELHTLWQNEERAAVSSGKLNEIWHRRHDYWLLAGIVLHGYARWQDIQNDAQFAIINEPFKTEANKGNFLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNLSQEPAHPAMALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPATLSRIPPIAARLQMSERSILSRLASKGTEPHPTPAFPPGPYATPPGYGAAFSAAPVGALAAAGANYSQMPAGSFITAATNGPPVLVKKEKEMVGALVSDGLDRKEPRAGEVICIDD*