Part of scaffold_43 (Scaffold)

For more information consult the page for scaffold_43 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TP53 ENSTTRG00000010250 (Bottlenosed dolphin)

Gene Details

tumor protein p53

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009721, Bottlenosed dolphin)

Protein Percentage 96.59%
cDNA percentage 97.16%
Ka/Ks Ratio 0.33749 (Ka = 0.018, Ks = 0.0532)

TP53 ENSBTAG00000001069 (Cow)

Gene Details

Cellular tumor antigen p53

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001420, Cow)

Protein Percentage 87.75%
cDNA percentage 89.74%
Ka/Ks Ratio 0.26406 (Ka = 0.065, Ks = 0.2463)

TP53  (Minke Whale)

Gene Details

tumor protein p53

External Links

Gene match (Identifier: BACU001233, Minke Whale)

Protein Percentage 91.45%
cDNA percentage 93.73%
Ka/Ks Ratio 0.56713 (Ka = 0.0553, Ks = 0.0976)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1059 bp    Location:2007581..2020415   Strand:+
>bmy_01732
ATGGAGGAGTCACAGGCAGAACTCGGCGTGGAGCCCCCTCTGAGTCAGGAGACGTTTTCAGACTTGTGGAAACTGCTTCCTGAAAACAACCTTCTGTCCTCTGAGCTCTCCCCGGCCGTGGATGACCTGCTGCTGTCCCCAGAAGACGTCGCAAACTGGCTGGATGAACGTCCAGATGAAGCCCCCCAAATGCCAGAGCCTCCTGCGCTAGCTGCCCCCGCCCCCGCCGCCCCAGCACCAGCCACCTCCTGGCCCCTGTCGTCCTTTGTCCCTTCCCAGAAGACCTACCCTGGCAGCTATGGGTTCCGTCTAGGTTTCCTACATTCTGGAACAGCCAAGTCTGTAACCTGCACGTATTCCCCTGCCCTCAACAAGCTGTTTTGCCAGCTGGCCAAGACCTGCCCGGTGCAGCTGTGGGTCAGCTCACCACCCCCGCCCGGCACCCGGGTCCGCGCCATGGCCATCTACAAGAAGTCAGAGTACATGACGGAGGTTGTGAGGCGCTGTCCCCACCACGAGCGCTGCTCTGACTATAGCGACGGTCTGGCCCCTCCTCAGCATCTCATCCGGGTGGAAGGGAATTTACGTGCTGAATATTTGGACGACAGAAACACTTTTCGACACAGCGTGGTGGTGCCCTACGAGCCGCCCGAGGTCTGTGGTAATCTGCTGGGACGGAACAGCTTTGAGGTGCGTGTTTGTGCCTGTCCTGGGAGAGACCGCCGCACAGAGGAAGAAAATTTCCACAAGAAGGGGCAGTCTGGCCCTGAGCCGCCCCCTGGGAGCGCTAAGCGAGCACTGCCTACCAGCACCAGCTCCTCTCCACCGCAAAAGAAGAAACCACTGGATGGAGAATATTTCACTCTCCAGATCCGTGGGCGTGAACGCTTTGAGATGTTCCGAGARCTGAATGAGGCCTTGGAGCTGAAGGATGCTCAGGCTGGAAAGGAGCCAGGGGAAAGCAGGGCTCACTCTAGCCACCTGAAGTCTAAGAAGGGGCAGTCTCCCTCCCGCCATAAAAAACTGATGTTCAAGAGAGAAGGGCCTGACTCAGACTGA

Related Sequences

bmy_01732T0 Protein

Length: 353 aa      View alignments
>bmy_01732T0
MEESQAELGVEPPLSQETFSDLWKLLPENNLLSSELSPAVDDLLLSPEDVANWLDERPDEAPQMPEPPALAAPAPAAPAPATSWPLSSFVPSQKTYPGSYGFRLGFLHSGTAKSVTCTYSPALNKLFCQLAKTCPVQLWVSSPPPPGTRVRAMAIYKKSEYMTEVVRRCPHHERCSDYSDGLAPPQHLIRVEGNLRAEYLDDRNTFRHSVVVPYEPPEVCGNLLGRNSFEVRVCACPGRDRRTEEENFHKKGQSGPEPPPGSAKRALPTSTSSSPPQKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGESRAHSSHLKSKKGQSPSRHKKLMFKREGPDSD*