Sequence detailsbmy_01739 (Coding sequence)

Part of scaffold_43 (SequenceType object (1))

For more information consult the page for scaffold_43 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SENP3ENSTTRG00000010205 (Bottlenosed dolphin)

Gene Details

SUMO1/sentrin/SMT3 specific peptidase 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009673, Bottlenosed dolphin)

Protein Percentage 99.48%
cDNA percentage 99.3%
Ka/Ks Ratio 0.10148 (Ka = 0.0023, Ks = 0.0227)

SENP3ENSBTAG00000000131 (Cow)

Gene Details

sentrin-specific protease 3

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000000143, Cow)

Protein Percentage 97.39%
cDNA percentage 96.4%
Ka/Ks Ratio 0.11276 (Ka = 0.0122, Ks = 0.1085)

Additional orthologs identified in other species via the OPTIC pipeline.

SENP3 (Human)   Senp3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1833 bp    Location:2096149..2087618   Strand:-
Raw sequence 
>bmy_01739
ATGCCCACACACCCCACTCATCCCACGGTGATGGAGAACTCTCTTCCCACTCTAGATCACGGTTTCCCTGCGGAAATTGTGTTCTCCTCAGGTTACTGGAAGATGAAAGAGACTATACAAGGGACCGGGTCTTGGGGGCCTGAGCCTCCTGGACCCGGCATAGCCCCAGCTTATTCAAGTCCCAGGCGGGAGCGTCTTCGTTGGCCCCCACCCCCCAAACCCCGACTCAAATCAGGTGGAGGGTTTGGGCCAGATCCTGGGTCAGGGACCACAGTGCCAACCAGACGCCTTCCTGTCCCTCGGCCCTCTTTTGATGCCTCAGCTAGTGAAGAGGAGGAAGAAGAAGAGGACGACGAGGAGGAAGATGAGGAAGAGGAAGTGGCAGCTTGGAGGCTGCCCCCAAGATGGGGTCAGCTGGGAGCCTCCCAGCGGCCTCGCCCTCCCCCTCCCCGCCCTGCTCATCGGAAAACGTGTTCACAGCGCCGACGCAGAGCTATGAGAGCCTTCCGGATGCTGCTCTACTCAAAAAGCACCTCGCTGACATTCCACTGGAAGCTTTGGGGGCGCCACCGGGGCCGGCGGCGGAGCCTTGCACACCCCAAGAACCATCTTTCACCCCAGGAAGGGGGTGTGACACCACAGGTGCCATCCCCCTGCTGTCGTTTTGACTCCCCACGGGGCCCACCTCCCCCCCGGCTGGGTCTGCTAGGTGCTCTCATGGCTGAGGATGGGGTGAGAGGGTCTCCACCAGTGCCCTCTGGGCCCCCCATGGAGGAAGATGGATTAAGGTGGACTCCAAAGTCTCCTCTGGACCCTGACTCGGGCCTCCTCTCTTGTACTCTGCCCAACGGCTTTGGGGGACCACCTGGGCCAGAAGGGGAGCGAAGTCTGGCACCCCCTGATGCCAGCATCCTCATCAGCAATGTGTGCAGCATCGGGGACCATGTGGCCCAGGAGCTTTTTCAGGGCTCAGATTTGGGCACTGCAGAAGAGGCTGAGCGGACTGGGGAGAAATCTGGCCAGCACAGCCCCCTGCGGGAGGAGCATGTCACCTGTGTGCAGAGCATCTTGGATGAATTCCTTCAAACTTACGGCAGCCTCATCCCCCTCAGCACTGATGAGGTAGTAGAGAAACTGGAGGACATTTTCCAGCAGGAGTTTTCTACACCTTCCAGGAAGGGCCTGGTGCTGCAGCTGATCCAGTCATACCAGCGGATGCCAGGCAATGCCATGGTGAGGGGCTTCCGAGTTGCCTATAAGCGGCATGTGCTGACCATGGACGACCTGGGGACCTTATATGGACAGAACTGGCTCAATGACCAGGTGATGAACATGTATGGAGACCTCGTCATGGACACGGTCCCTGAAAAGGTGCATTTCTTCAACAGTTTCTTCTATGATAAACTCCGTACCAAGGGTTATGATGGGGTGAAAAGGTGGACCAAAAACGTGGACATCTTCAATAAAGAGCTACTGCTAATCCCCATCCACCTGGAGGTGCATTGGTCCCTCATCTCTGTTGACGTGAGGCGGCGCACCATCACCTATTTTGATTCGCAGCGCACCCTGAACCGCCGCTGCCCTAAGCATATTGCCAAGTATCTACAGGCAGAGGCAGTGAAGAAAGACCGGCTGGATTTCCACCAGGGCTGGAAAGGTTACTTCAAAATGAATGTGGCCAGGCAGAATAATGACAGTGACTGCGGCGCCTTTGTGTTGCAGTATTGCAAGCACCTGGCCCTGTCTCAGCCATTCAGCTTCACTCAGCAGGACATGCCCAAACTTCGTCGGCAGATCTACAAGGAGCTGTGTCACTGCAAACTCACTGTGTGA

Related Sequences

bmy_01739T0 SequenceType object (3)

Length: 611 aa      View alignments
>bmy_01739T0
MPTHPTHPTVMENSLPTLDHGFPAEIVFSSGYWKMKETIQGTGSWGPEPPGPGIAPAYSSPRRERLRWPPPPKPRLKSGGGFGPDPGSGTTVPTRRLPVPRPSFDASASEEEEEEEDDEEEDEEEEVAAWRLPPRWGQLGASQRPRPPPPRPAHRKTCSQRRRRAMRAFRMLLYSKSTSLTFHWKLWGRHRGRRRSLAHPKNHLSPQEGGVTPQVPSPCCRFDSPRGPPPPRLGLLGALMAEDGVRGSPPVPSGPPMEEDGLRWTPKSPLDPDSGLLSCTLPNGFGGPPGPEGERSLAPPDASILISNVCSIGDHVAQELFQGSDLGTAEEAERTGEKSGQHSPLREEHVTCVQSILDEFLQTYGSLIPLSTDEVVEKLEDIFQQEFSTPSRKGLVLQLIQSYQRMPGNAMVRGFRVAYKRHVLTMDDLGTLYGQNWLNDQVMNMYGDLVMDTVPEKVHFFNSFFYDKLRTKGYDGVKRWTKNVDIFNKELLLIPIHLEVHWSLISVDVRRRTITYFDSQRTLNRRCPKHIAKYLQAEAVKKDRLDFHQGWKGYFKMNVARQNNDSDCGAFVLQYCKHLALSQPFSFTQQDMPKLRRQIYKELCHCKLTV*