Part of scaffold_43 (Scaffold)

For more information consult the page for scaffold_43 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ASGR1 ENSTTRG00000009672 (Bottlenosed dolphin)

Gene Details

asialoglycoprotein receptor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009167, Bottlenosed dolphin)

Protein Percentage 97.2%
cDNA percentage 97.44%
Ka/Ks Ratio 0.18848 (Ka = 0.0148, Ks = 0.0786)

ASGR1 ENSBTAG00000012071 (Cow)

Gene Details

asialoglycoprotein receptor 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016010, Cow)

Protein Percentage 88.11%
cDNA percentage 89.98%
Ka/Ks Ratio 0.15738 (Ka = 0.0568, Ks = 0.3611)

ASGR1  (Minke Whale)

Gene Details

asialoglycoprotein receptor 1

External Links

Gene match (Identifier: BACU001268, Minke Whale)

Protein Percentage 97.9%
cDNA percentage 97.9%
Ka/Ks Ratio 0.11582 (Ka = 0.0089, Ks = 0.0769)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 930 bp    Location:2416842..2419903   Strand:+
>bmy_01771
ATGACAAAGGAGTATCAAGATCTTCAGCATCTGGACAACGAGGAGAATGACCATCAGCACAGAAAAAGGCCGCCTCCTCCCCACTCACTCTTTCGGCGTCTCTGCTCCGGACCCAGCCTCATCCTGATCTCCATCGGCCTTAGCCTCCTGCTGCTGGTGGTTGTCTGTGTGATCGGATCCCAGAACTCCAAGCTGCAGGAGGAGCTGCGGGCCCTGAGAGAAACGTTCAGCAACCTCACAGTGAGCACGGAGGCCAAGGTCAAGGCCCTGAGCGTCCAGGGAGGAAATGTGGGCAGAAAGATGAAGTCTCTGGAGTCCCAGCTGGAGAAACAGCAGCAGGACCTGAGTGAAGATCACTCCAGCTTGCTTCTCCACGTGCAGCAGTTTGTGTCTGACCTGCGAAGCCTGAGCTGTCAGGTGGCCGTCCTCCAGGGCAACGGTGAGGGGGTGGGTGCTGCCCGGCCCCGCTTTCCTGCCCACTTCCGCTCAGCCCCTCACCCTCCCTCTGCCTGTGAAAGGACGTGCTGCCCCGTGAACTGGGTGGAGCATGAAGGCAGCTGCTACTGGTTCTCTCGCTCGGGGAAGCCCTGGCCCGAGGCTGAGAAGTACTGCCAGCTGGAGGACGCCCACCTGGTGGTGGTGGGCTCCTGGGAGGAGCAGAAATTTATCCAGCATCACATGGGCCCTGTGAACACCTGGATGGGTCTCACTGACCAAAACGGGCCCTGGAAATGGGTAGACGGGACAGACTATGAGTCGGGCTTCAAGAACTGGAGACCAGAGCAGCCGGACGACTGGTATGGGCACGGGCTCGGAGGAGGTGAAGACTGTGCCCACTTCACGGGCGACGGCCGCTGGAACGATGACGTCTGTCAGAGGCCCTACCGGTGGGTCTGCGAGACACAGCGGGACAGGGACAGCGAAAGCTAG

Related Sequences

bmy_01771T0 Protein

Length: 310 aa      View alignments
>bmy_01771T0
MTKEYQDLQHLDNEENDHQHRKRPPPPHSLFRRLCSGPSLILISIGLSLLLLVVVCVIGSQNSKLQEELRALRETFSNLTVSTEAKVKALSVQGGNVGRKMKSLESQLEKQQQDLSEDHSSLLLHVQQFVSDLRSLSCQVAVLQGNGEGVGAARPRFPAHFRSAPHPPSACERTCCPVNWVEHEGSCYWFSRSGKPWPEAEKYCQLEDAHLVVVGSWEEQKFIQHHMGPVNTWMGLTDQNGPWKWVDGTDYESGFKNWRPEQPDDWYGHGLGGGEDCAHFTGDGRWNDDVCQRPYRWVCETQRDRDSES*