Part of scaffold_43 (Scaffold)

For more information consult the page for scaffold_43 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ALOX12 ENSTTRG00000008683 (Bottlenosed dolphin)

Gene Details

arachidonate 12-lipoxygenase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008234, Bottlenosed dolphin)

Protein Percentage 91.7%
cDNA percentage 94.12%
Ka/Ks Ratio 0.52015 (Ka = 0.0515, Ks = 0.0991)

BT.92152 ENSBTAG00000021933 (Cow)

Gene Details

arachidonate 12-lipoxygenase, 12S-type

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029240, Cow)

Protein Percentage 87.93%
cDNA percentage 90.1%
Ka/Ks Ratio 0.30334 (Ka = 0.0715, Ks = 0.2356)

ALOX12  (Minke Whale)

Gene Details

arachidonate 12-lipoxygenase

External Links

Gene match (Identifier: BACU001276, Minke Whale)

Protein Percentage 58.94%
cDNA percentage 65.65%
Ka/Ks Ratio 0.13549 (Ka = 0.307, Ks = 2.2659)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2058 bp    Location:2567026..2555095   Strand:-
>bmy_01781
ATGGGCCGCTACCGCATCCGCGTGGCCACCGGGGCCGCACTCTTCGCCGGGTCGCACGACCGCGTGCAGCTGTGGCTGGTTGGGGCGCGCGGGGAGACGGAGCTGGAGCTGCAGCTGTTGCCGGCGCGGGGCCAGGAGGAGGAGTTTGAGCATGACATTCCCGAGGACTTGGGGCCACTGCAGTTCGTGAAGCTGCGCAAACACCACTCCCTGGTGGACAACGCGTGGTTCTGCGACCACATCACGGTGCAGGGCCCTGTAGCCTTCGAGGAGGCCGCCTTCCCGTGCTACTGCTGGGTGCAGGCCGACAGCGTGCTCCTGCCTGGCAGGAAACAACGCATTGGACGTGTTCCAGAAACATCGAGAGAAGGAACTCAAAGAAAGACGTCAGATATACTGGTGACCACCCACCTACAGGGCCTCTCAGTGGTACCCCCCATCACTGACCTGGACACCCTCCCTGAAGCCTTGTCCCCATCTCCTAGCTGGGCCACATGGAAGGAAGGGTTACCCCTGACAATGGCTGCGGGCTGTGAGGACGATCTACCTGCAAATATGAGATTCCACGAGGAGAAGAGGCTGGACTTTGAGTGGACACTGAAGGCAGGGGCTCTGGAGATGGTCCTCAAACGCGTTTACACCCTCCTGGGGTCCTGGAACCACGTGGAGAATTTTGATCACATCTTCTGGGGCCAGAAGAGTATCCTGGCTGAGAAGGTTCGCCAACGCTGGCAGGACGATGAATTGTTTGGCTACCAGTTCCTCAATGGCGCCAATCCCATGCTGCTGAGACGCTGCACCTCTCTGCCCTCCCGGCTAGTGCTGCCCTCGGGGATGGAGGAGCTACGGGCCCAGCTGGAGAAAGAACTCCAGAACAGTTCCCTGTTTGAGGCTGATTTCATTCTCCTGGACGGAATTCCAGCCAATGTGATCCGAGGAGAGAAGCAGTACCTGGCTGCCCCCCTCGTCATGCTGAAGATGGACACCAGTGGGAAGCTGCTACCCATGGTCATCCAGATCCAGCCTCCCAGCCCCAGCTCCCCGACCCCACCACTGTTCCTGCCCTCAGATCCTCCACTTGCCTGGCTCCTGGCAAAGTCCTGGGTCCGAAATTCAGATTTCCAACTGCACCAGCTCCAGTATCATCTGCTGAACACCCACCTGCTGGCTGAGGTCATTGCTGTGGCCACCATGAGGTGCCTCCCGGGGCTGCACCCTGTCTTCAAGCTCCTGATCCCACACATCCGCTACACGATAGAAATCAACACCCGGGCACGGACCCAACTCATCTCAGACGGAGGTATATTTGATAAGGCTGTGAGCACCGGTGGAGGGGGCCACGTGCACTTGCTCCACCGGGCCCTGGCTCAGCTGACCTACTGCTCCCTCTGTCCTCCCAACAATCTGGCTGACCGCGGCCTGCTGGGAACCCCGGGTGCTCTCTATGCCCACGACGCTTTACAACTCTGGGAGATCACTGCCCGGTACGTGGAGGGGATCATCCACCTTTTCTACCGCGGGGATGACGTCGTGAGAGGGGACCCTGAGCTGCAGGCCTGGTGTCGGGAGATCACTGAGGTGGGGCTGTGCCAGGCCCAGGACCGAGGTTTCCCCATCTCCTTCCAGTCCCAGAATCAACTCTGCCATTTCCTTACCATGTGTGTCTTCACGTGCACTGCTCAGCATGGGGCCATCAACCAGGGCCAGCTGGACTGGTATGCCTGGGTCCCTAATGCCCCATGCACAATGCGGATGCCCCCACCTACCACCAAGGAAGATGTGACAATGGCCACGGTGATGGGCTCACTACCTGATGTCCGACAGGCCTGTCTTCAAATGGTCATCACATGGCATCTGGGGCGCCGCCAGCCAGACATGGTGCCTCTGGGGCATCACAAAGAAAAGTATTTCTCAGACCCCAAGGCCAAGTCTGTACTAAACCAATTCCAAACAGATCTGGAAAACTTGGAAAGGGAGATTACAGCCCGGAATGAGCAACTTGACCTGCCCTATGAATACCTAAAGCCCAGCCACATAGAGAACAGCATCACTATCTGA

Related Sequences

bmy_01781T0 Protein

Length: 686 aa      View alignments
>bmy_01781T0
MGRYRIRVATGAALFAGSHDRVQLWLVGARGETELELQLLPARGQEEEFEHDIPEDLGPLQFVKLRKHHSLVDNAWFCDHITVQGPVAFEEAAFPCYCWVQADSVLLPGRKQRIGRVPETSREGTQRKTSDILVTTHLQGLSVVPPITDLDTLPEALSPSPSWATWKEGLPLTMAAGCEDDLPANMRFHEEKRLDFEWTLKAGALEMVLKRVYTLLGSWNHVENFDHIFWGQKSILAEKVRQRWQDDELFGYQFLNGANPMLLRRCTSLPSRLVLPSGMEELRAQLEKELQNSSLFEADFILLDGIPANVIRGEKQYLAAPLVMLKMDTSGKLLPMVIQIQPPSPSSPTPPLFLPSDPPLAWLLAKSWVRNSDFQLHQLQYHLLNTHLLAEVIAVATMRCLPGLHPVFKLLIPHIRYTIEINTRARTQLISDGGIFDKAVSTGGGGHVHLLHRALAQLTYCSLCPPNNLADRGLLGTPGALYAHDALQLWEITARYVEGIIHLFYRGDDVVRGDPELQAWCREITEVGLCQAQDRGFPISFQSQNQLCHFLTMCVFTCTAQHGAINQGQLDWYAWVPNAPCTMRMPPPTTKEDVTMATVMGSLPDVRQACLQMVITWHLGRRQPDMVPLGHHKEKYFSDPKAKSVLNQFQTDLENLEREITARNEQLDLPYEYLKPSHIENSITI*