Part of scaffold_45 (Scaffold)

For more information consult the page for scaffold_45 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCDC28A ENSTTRG00000005992 (Bottlenosed dolphin)

Gene Details

coiled-coil domain containing 28A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005660, Bottlenosed dolphin)

Protein Percentage 54.67%
cDNA percentage 59.56%
Ka/Ks Ratio 0.58853 (Ka = 0.2532, Ks = 0.4302)

CCDC28A ENSBTAG00000015516 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020625, Cow)

Protein Percentage 76.89%
cDNA percentage 80.15%
Ka/Ks Ratio 0.54694 (Ka = 0.1955, Ks = 0.3575)

CCDC28A  (Minke Whale)

Gene Details

coiled-coil domain containing 28A

External Links

Gene match (Identifier: BACU014345, Minke Whale)

Protein Percentage 81.82%
cDNA percentage 84.38%
Ka/Ks Ratio 0.39183 (Ka = 0.1384, Ks = 0.3531)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 729 bp    Location:1975807..1962519   Strand:-
>bmy_01791
ATGCGGTGCCAGGGCCGGAGACGGGAGCCGCACAGGTGGAACAGGAAGAGGCGAGGCTCCCGGCCAGTAAGCGGAGGCTCCGCCTCCTTACGTCACTTCCGTAAACAAAGGGCATTGTGGAGGCGAGAGGTCCGGGATGTGACCCCGGCTCAAGCTGCAGCTGTAGCATCGGCGGCTGCAGCTGCGGCGGTGGCTTCAGAGGCCCCGGGGTCCTTGCAGGTTGTGGAAGAGGACCCCGATCCCCTTCTTCCTCAGGTCATAAGAAGCTGGCCTTGGTGCAGTAAGGAACTTAAAACAATGGAGGAGCGCAAAGTGAAGAGGAGGAGTCCTAAGTCTTTTAGTGCCCACTCTACTCAGGTTGTTAATGCCAAAAAAAATGCTATTCCAGTTAGTAAAAGCACGGGGTTTTCAAATCCTGCATCACAGTCAACTTCACAGCGACCAAAGTTAAAAAGAGTGATGAAAGAAAAGACCAAACCTCAGGGTGGAGAAGGCAAAGGCGCTCAGTCAAGCCCGATCCAGCACTCCTTCCTCACCGATGTCTCTGATGTCCAGGAGATGGAGAGGGGCCTCCTCAGCCTTTTGAATGACTTCCACTCTGGAAAACTCCAAGCATTCGGTATTTTTGTATGCGAGTTCACAAAGTGTATGCTAGAAGAATTGAATTCTTCCATGTATCCTTTGCTTAACATCAACAGTGAAAAGTTCACAGATTATAATTTTTGGTGA

Related Sequences

bmy_01791T0 Protein

Length: 243 aa      View alignments
>bmy_01791T0
MRCQGRRREPHRWNRKRRGSRPVSGGSASLRHFRKQRALWRREVRDVTPAQAAAVASAAAAAAVASEAPGSLQVVEEDPDPLLPQVIRSWPWCSKELKTMEERKVKRRSPKSFSAHSTQVVNAKKNAIPVSKSTGFSNPASQSTSQRPKLKRVMKEKTKPQGGEGKGAQSSPIQHSFLTDVSDVQEMERGLLSLLNDFHSGKLQAFGIFVCEFTKCMLEELNSSMYPLLNINSEKFTDYNFW*